Detailed information NTG1123502

Bioinformatically predicted

Overview

• Name: Cj0011c
• Type: Machinery gene
• Locus tag: EL238_RS00050
• Genome accession: NZ_LR134507
• Coordinates: 14698..14937 (-)
• Length: 79 a.a.
• NCBI ID: WP_002855574.1
• Uniprot ID: A0AA44KFG0
• Organism: Campylobacter jejuni strain NCTC12851
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 9698..19937

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL238_RS00040 (NCTC12851_00008)	gltD	12643..14088 (+)	1446	WP_126393719.1	glutamate synthase subunit beta	-
EL238_RS00045 (NCTC12851_00009)	rnhB	14089..14664 (-)	576	WP_052776041.1	ribonuclease HII	-
EL238_RS00050 (NCTC12851_00010)	Cj0011c	14698..14937 (-)	240	WP_002855574.1	ComEA family DNA-binding protein	Machinery gene
EL238_RS00055 (NCTC12851_00011)	rrc	15002..15649 (-)	648	WP_002855562.1	ferritin family protein	-
EL238_RS00060 (NCTC12851_00012)	ilvD	15809..17485 (+)	1677	WP_002857690.1	dihydroxy-acid dehydratase	-
EL238_RS00065	-	17497..18020 (-)	524	Protein_12	YagU family protein	-
EL238_RS00070 (NCTC12851_00015)	-	18112..19338 (-)	1227	WP_002853125.1	HD domain-containing protein	-

Sequence

Protein

• Length: 79 a.a.
• Molecular weight: 8838.48 Da
• Isoelectric Point: 10.1677

>NTDB_id=1123502 EL238_RS00050 WP_002855574.1 14698..14937(-) (Cj0011c) [Campylobacter jejuni strain NCTC12851]
MKKLLFLFFALTAFLFGAVNINTATLKELKSLNGIGEAKAKAILEYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITVE

Nucleotide

• Length: 240 bp

>NTDB_id=1123502 EL238_RS00050 WP_002855574.1 14698..14937(-) (Cj0011c) [Campylobacter jejuni strain NCTC12851]
ATGAAAAAATTACTATTTTTATTTTTTGCTTTAACGGCTTTTCTCTTTGGTGCTGTAAATATCAACACTGCAACACTAAA
AGAATTAAAAAGTTTAAATGGTATTGGCGAAGCTAAGGCTAAAGCGATTTTAGAATACCGCAAAGAAGCAAATTTTACAA
GCATTGATGATCTTAAAAAAGTTAAAGGCATAGGTGATAAGCTTTTTGAAAAAATCAAAAATGATATCACAGTAGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (18-77)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	98.734	100	0.987
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comEA	Bacillus subtilis subsp. subtilis str. 168	59.016	77.215	0.456
comEA	Acinetobacter baylyi ADP1	55.738	77.215	0.43
comEA	Staphylococcus aureus MW2	55.738	77.215	0.43
comEA	Staphylococcus aureus N315	55.738	77.215	0.43
comEA/celA/cilE	Streptococcus pneumoniae R6	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus mitis NCTC 12261	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae Rx1	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae D39	50.794	79.747	0.405
comEA	Lactococcus lactis subsp. cremoris KW2	51.613	78.481	0.405
comEA	Vibrio cholerae C6706	62.745	64.557	0.405
comEA	Vibrio cholerae strain A1552	62.745	64.557	0.405
comEA/celA/cilE	Streptococcus mitis SK321	49.206	79.747	0.392
comEA/comE1	Glaesserella parasuis strain SC1401	47.619	79.747	0.38
comEA	Acinetobacter baumannii D1279779	47.619	79.747	0.38
comE1/comEA	Haemophilus influenzae Rd KW20	50.847	74.684	0.38
comEA	Acinetobacter baumannii strain A118	46.032	79.747	0.367
comEA	Vibrio campbellii strain DS40M4	48.333	75.949	0.367