Detailed information NTG0105614

Bioinformatically predicted

Overview

• Name: Cj0011c
• Type: Machinery gene
• Locus tag: R8609_RS00060
• Genome accession: NZ_AP028412
• Coordinates: 16533..16772 (-)
• Length: 79 a.a.
• NCBI ID: WP_002855574.1
• Uniprot ID: A0AA44KFG0
• Organism: Campylobacter jejuni strain IDH-12128
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 11533..21772

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8609_RS00045 (I12128_00080)	-	12748..14469 (+)	1722	WP_002868987.1	DUF262 domain-containing protein	-
R8609_RS00050 (I12128_00090)	gltD	14479..15924 (+)	1446	WP_052775792.1	glutamate synthase subunit beta	-
R8609_RS00055 (I12128_00100)	rnhB	15925..16500 (-)	576	WP_002853153.1	ribonuclease HII	-
R8609_RS00060 (I12128_00110)	Cj0011c	16533..16772 (-)	240	WP_002855574.1	ComEA family DNA-binding protein	Machinery gene
R8609_RS00065 (I12128_00120)	rrc	16837..17484 (-)	648	WP_002853081.1	ferritin family protein	-
R8609_RS00070 (I12128_00130)	ilvD	17644..19320 (+)	1677	WP_070293218.1	dihydroxy-acid dehydratase	-
R8609_RS00075	-	19332..19728 (-)	397	Protein_13	DUF1440 domain-containing protein	-
R8609_RS00080 (I12128_00150)	-	19820..21046 (-)	1227	WP_002855588.1	HD domain-containing protein	-

Sequence

Protein

• Length: 79 a.a.
• Molecular weight: 8838.48 Da
• Isoelectric Point: 10.1677

>NTDB_id=105614 R8609_RS00060 WP_002855574.1 16533..16772(-) (Cj0011c) [Campylobacter jejuni strain IDH-12128]
MKKLLFLFFALTAFLFGAVNINTATLKELKSLNGIGEAKAKAILEYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITVE

Nucleotide

• Length: 240 bp

>NTDB_id=105614 R8609_RS00060 WP_002855574.1 16533..16772(-) (Cj0011c) [Campylobacter jejuni strain IDH-12128]
ATGAAAAAATTACTATTTTTATTTTTTGCTTTAACGGCTTTTCTCTTTGGTGCTGTAAATATCAACACTGCAACGCTAAA
AGAATTAAAAAGTTTAAATGGTATTGGCGAAGCTAAGGCTAAAGCGATTTTAGAATACCGTAAAGAAGCAAATTTTACAA
GTATTGATGATCTTAAAAAAGTTAAAGGCATAGGTGATAAGCTTTTTGAAAAAATCAAAAATGATATCACAGTAGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (18-77)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	98.734	100	0.987
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comEA	Bacillus subtilis subsp. subtilis str. 168	59.016	77.215	0.456
comEA	Acinetobacter baylyi ADP1	55.738	77.215	0.43
comEA	Staphylococcus aureus MW2	55.738	77.215	0.43
comEA	Staphylococcus aureus N315	55.738	77.215	0.43
comEA/celA/cilE	Streptococcus pneumoniae R6	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus mitis NCTC 12261	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae Rx1	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae D39	50.794	79.747	0.405
comEA	Lactococcus lactis subsp. cremoris KW2	51.613	78.481	0.405
comEA	Vibrio cholerae C6706	62.745	64.557	0.405
comEA	Vibrio cholerae strain A1552	62.745	64.557	0.405
comEA/celA/cilE	Streptococcus mitis SK321	49.206	79.747	0.392
comEA/comE1	Glaesserella parasuis strain SC1401	47.619	79.747	0.38
comEA	Acinetobacter baumannii D1279779	47.619	79.747	0.38
comE1/comEA	Haemophilus influenzae Rd KW20	50.847	74.684	0.38
comEA	Acinetobacter baumannii strain A118	46.032	79.747	0.367
comEA	Vibrio campbellii strain DS40M4	48.333	75.949	0.367