Detailed information NTG0105186

Bioinformatically predicted

Overview

• Name: Cj0011c
• Type: Machinery gene
• Locus tag: R8610_RS00060
• Genome accession: NZ_AP028384
• Coordinates: 16512..16751 (-)
• Length: 79 a.a.
• NCBI ID: WP_002922274.1
• Uniprot ID: A0A5T1RNX2
• Organism: Campylobacter jejuni strain BCH-11253
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 11512..21751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8610_RS00045 (B11253_00080)	-	12750..14441 (+)	1692	WP_002922276.1	DUF262 domain-containing protein	-
R8610_RS00050 (B11253_00090)	gltD	14457..15902 (+)	1446	WP_002922275.1	glutamate synthase subunit beta	-
R8610_RS00055 (B11253_00100)	rnhB	15903..16478 (-)	576	WP_002866799.1	ribonuclease HII	-
R8610_RS00060 (B11253_00110)	Cj0011c	16512..16751 (-)	240	WP_002922274.1	ComEA family DNA-binding protein	Machinery gene
R8610_RS00065 (B11253_00120)	rrc	16816..17463 (-)	648	WP_002855562.1	ferritin family protein	-
R8610_RS00070 (B11253_00130)	ilvD	17623..19299 (+)	1677	WP_002922271.1	dihydroxy-acid dehydratase	-
R8610_RS00075 (B11253_00140)	-	19311..19835 (-)	525	WP_002922270.1	YagU family protein	-
R8610_RS00080 (B11253_00150)	-	19927..21153 (-)	1227	WP_002922269.1	HD domain-containing protein	-

Sequence

Protein

• Length: 79 a.a.
• Molecular weight: 8868.50 Da
• Isoelectric Point: 10.1677

>NTDB_id=105186 R8610_RS00060 WP_002922274.1 16512..16751(-) (Cj0011c) [Campylobacter jejuni strain BCH-11253]
MKKLLFLFFTLTAFLFGAVNINTATLKELKSLNGIGEAKAKAILEYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITVE

Nucleotide

• Length: 240 bp

>NTDB_id=105186 R8610_RS00060 WP_002922274.1 16512..16751(-) (Cj0011c) [Campylobacter jejuni strain BCH-11253]
ATGAAAAAATTACTATTTTTATTTTTTACTTTAACGGCTTTTCTCTTTGGTGCTGTAAATATCAACACTGCAACACTAAA
AGAATTAAAAAGTTTAAATGGTATTGGCGAAGCTAAGGCTAAAGCGATTTTAGAATACCGCAAAGAAGCAAATTTTACAA
GTATTGATGATCTTAAAAAAGTTAAAGGCATAGGTGATAAGCTTTTTGAAAAAATCAAAAATGATATCACAGTAGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (18-77)

3D structure

• AlphaFold DB: A0A5T1RNX2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	97.468	100	0.975
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comE	Neisseria gonorrhoeae MS11	53.086	100	0.544
comEA	Bacillus subtilis subsp. subtilis str. 168	59.016	77.215	0.456
comEA	Acinetobacter baylyi ADP1	55.738	77.215	0.43
comEA	Staphylococcus aureus MW2	55.738	77.215	0.43
comEA	Staphylococcus aureus N315	55.738	77.215	0.43
comEA/celA/cilE	Streptococcus pneumoniae D39	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus mitis NCTC 12261	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae Rx1	50.794	79.747	0.405
comEA/celA/cilE	Streptococcus pneumoniae R6	50.794	79.747	0.405
comEA	Lactococcus lactis subsp. cremoris KW2	51.613	78.481	0.405
comEA	Vibrio cholerae C6706	62.745	64.557	0.405
comEA	Vibrio cholerae strain A1552	62.745	64.557	0.405
comEA/celA/cilE	Streptococcus mitis SK321	49.206	79.747	0.392
comEA/comE1	Glaesserella parasuis strain SC1401	47.619	79.747	0.38
comEA	Acinetobacter baumannii D1279779	47.619	79.747	0.38
comE1/comEA	Haemophilus influenzae Rd KW20	50.847	74.684	0.38
comEA	Acinetobacter baumannii strain A118	46.032	79.747	0.367
comEA	Vibrio campbellii strain DS40M4	48.333	75.949	0.367