Detailed information NTG0105107

Bioinformatically predicted

Overview

• Name: Cj0011c
• Type: Machinery gene
• Locus tag: R8634_RS00060
• Genome accession: NZ_AP028381
• Coordinates: 16512..16751 (-)
• Length: 79 a.a.
• NCBI ID: WP_317656241.1
• Uniprot ID: -
• Organism: Campylobacter jejuni strain BCH-11000
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 11512..21751

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8634_RS00045 (B11000_00080)	-	12751..14442 (+)	1692	WP_002870067.1	DUF262 domain-containing protein	-
R8634_RS00050 (B11000_00090)	gltD	14458..15903 (+)	1446	WP_052802977.1	glutamate synthase subunit beta	-
R8634_RS00055 (B11000_00100)	rnhB	15904..16479 (-)	576	WP_002853153.1	ribonuclease HII	-
R8634_RS00060 (B11000_00110)	Cj0011c	16512..16751 (-)	240	WP_317656241.1	ComEA family DNA-binding protein	Machinery gene
R8634_RS00065 (B11000_00120)	rrc	16816..17463 (-)	648	WP_002855562.1	ferritin family protein	-
R8634_RS00070 (B11000_00130)	ilvD	17623..19299 (+)	1677	WP_052805446.1	dihydroxy-acid dehydratase	-
R8634_RS00075	-	19311..19707 (-)	397	Protein_13	DUF1440 domain-containing protein	-
R8634_RS00080 (B11000_00160)	-	19799..21025 (-)	1227	WP_002898837.1	HD domain-containing protein	-

Sequence

Protein

• Length: 79 a.a.
• Molecular weight: 8880.56 Da
• Isoelectric Point: 10.1677

>NTDB_id=105107 R8634_RS00060 WP_317656241.1 16512..16751(-) (Cj0011c) [Campylobacter jejuni strain BCH-11000]
MKKLLFLFFALTAFLFGVVNINTATLKELKSLNGIGEAKAKAILEYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITIE

Nucleotide

• Length: 240 bp

>NTDB_id=105107 R8634_RS00060 WP_317656241.1 16512..16751(-) (Cj0011c) [Campylobacter jejuni strain BCH-11000]
ATGAAAAAATTACTATTTTTATTTTTTGCTTTAACGGCTTTTCTCTTTGGTGTTGTAAATATCAACACTGCAACACTAAA
AGAATTAAAAAGTTTAAATGGTATTGGCGAAGCTAAAGCTAAAGCGATTTTAGAATACCGCAAAGAAGCAAATTTTACAA
GTATTGATGATCTTAAAAAAGTTAAAGGCATAGGTGATAAGCTTTTTGAAAAAATCAAAAATGATATCACAATAGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (18-77)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	98.734	100	0.987
comE	Neisseria gonorrhoeae MS11	50.617	100	0.519
comE	Neisseria gonorrhoeae MS11	50.617	100	0.519
comE	Neisseria gonorrhoeae MS11	50.617	100	0.519
comE	Neisseria gonorrhoeae MS11	50.617	100	0.519
comEA	Acinetobacter baylyi ADP1	57.377	77.215	0.443
comEA	Bacillus subtilis subsp. subtilis str. 168	57.377	77.215	0.443
comEA	Staphylococcus aureus MW2	57.377	77.215	0.443
comEA	Staphylococcus aureus N315	57.377	77.215	0.443
comEA	Lactococcus lactis subsp. cremoris KW2	53.226	78.481	0.418
comEA/comE1	Glaesserella parasuis strain SC1401	50	81.013	0.405
comEA	Vibrio cholerae strain A1552	62.745	64.557	0.405
comEA	Vibrio cholerae C6706	62.745	64.557	0.405
comEA/celA/cilE	Streptococcus pneumoniae D39	49.206	79.747	0.392
comEA/celA/cilE	Streptococcus pneumoniae R6	49.206	79.747	0.392
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	49.206	79.747	0.392
comEA/celA/cilE	Streptococcus mitis NCTC 12261	49.206	79.747	0.392
comEA/celA/cilE	Streptococcus pneumoniae Rx1	49.206	79.747	0.392
comEA	Acinetobacter baumannii D1279779	47.619	79.747	0.38
comEA/celA/cilE	Streptococcus mitis SK321	47.619	79.747	0.38
comE1/comEA	Haemophilus influenzae Rd KW20	50.847	74.684	0.38
comEA	Acinetobacter baumannii strain A118	46.032	79.747	0.367
comEA	Vibrio campbellii strain DS40M4	48.333	75.949	0.367