Detailed information NTG0105080

Bioinformatically predicted

Overview

• Name: Cj0011c
• Type: Machinery gene
• Locus tag: R8580_RS00055
• Genome accession: NZ_AP028380
• Coordinates: 14796..15035 (-)
• Length: 79 a.a.
• NCBI ID: WP_002853093.1
• Uniprot ID: A0AB36GBA9
• Organism: Campylobacter jejuni strain BCH-10998
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 9796..20035

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8580_RS00045 (B10998_00080)	gltD	12742..14187 (+)	1446	WP_063674846.1	glutamate synthase subunit beta	-
R8580_RS00050 (B10998_00090)	rnhB	14188..14763 (-)	576	WP_002857688.1	ribonuclease HII	-
R8580_RS00055 (B10998_00100)	Cj0011c	14796..15035 (-)	240	WP_002853093.1	ComEA family DNA-binding protein	Machinery gene
R8580_RS00060 (B10998_00110)	rrc	15100..15747 (-)	648	WP_002853081.1	ferritin family protein	-
R8580_RS00065 (B10998_00120)	ilvD	15907..17583 (+)	1677	WP_002857690.1	dihydroxy-acid dehydratase	-
R8580_RS00070 (B10998_00130)	-	17595..18119 (-)	525	WP_002857701.1	YagU family protein	-
R8580_RS00075 (B10998_00140)	-	18211..19437 (-)	1227	WP_002853125.1	HD domain-containing protein	-

Sequence

Protein

• Length: 79 a.a.
• Molecular weight: 8852.50 Da
• Isoelectric Point: 10.1677

>NTDB_id=105080 R8580_RS00055 WP_002853093.1 14796..15035(-) (Cj0011c) [Campylobacter jejuni strain BCH-10998]
MKKLLFLFFALTAFLFGAVNINTATLKELKSLNGIGEAKAKAILEYRKEANFTSIDDLKKVKGIGDKLFEKIKNDITIE

Nucleotide

• Length: 240 bp

>NTDB_id=105080 R8580_RS00055 WP_002853093.1 14796..15035(-) (Cj0011c) [Campylobacter jejuni strain BCH-10998]
ATGAAAAAATTACTATTTTTATTTTTTGCTTTAACGGCTTTTCTCTTTGGTGCTGTAAATATCAACACTGCAACACTAAA
AGAATTAAAAAGTTTAAATGGTATTGGCGAAGCTAAGGCTAAAGCGATTTTAGAATACCGCAAAGAAGCAAATTTTACAA
GTATTGATGATCTTAAAAAAGTTAAAGGCATAGGTGATAAGCTTTTTGAAAAAATCAAAAATGATATCACAATAGAATAA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (18-77)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
Cj0011c	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	100	100	1
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comE	Neisseria gonorrhoeae MS11	51.852	100	0.532
comEA	Staphylococcus aureus N315	57.377	77.215	0.443
comEA	Bacillus subtilis subsp. subtilis str. 168	57.377	77.215	0.443
comEA	Staphylococcus aureus MW2	57.377	77.215	0.443
comEA	Acinetobacter baylyi ADP1	57.377	77.215	0.443
comEA	Lactococcus lactis subsp. cremoris KW2	53.226	78.481	0.418
comEA	Vibrio cholerae strain A1552	62.745	64.557	0.405
comEA	Vibrio cholerae C6706	62.745	64.557	0.405
comEA/comE1	Glaesserella parasuis strain SC1401	49.206	79.747	0.392
comEA/celA/cilE	Streptococcus pneumoniae Rx1	49.206	79.747	0.392
comEA/celA/cilE	Streptococcus pneumoniae D39	49.206	79.747	0.392
comEA/celA/cilE	Streptococcus pneumoniae R6	49.206	79.747	0.392
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	49.206	79.747	0.392
comEA/celA/cilE	Streptococcus mitis NCTC 12261	49.206	79.747	0.392
comEA/celA/cilE	Streptococcus mitis SK321	47.619	79.747	0.38
comEA	Acinetobacter baumannii D1279779	47.619	79.747	0.38
comE1/comEA	Haemophilus influenzae Rd KW20	50.847	74.684	0.38
comEA	Acinetobacter baumannii strain A118	46.032	79.747	0.367
comEA	Vibrio campbellii strain DS40M4	48.333	75.949	0.367