Detailed information NTG1024674

Bioinformatically predicted

Overview

• Name: comX/sigX
• Type: Regulator
• Locus tag: AB1F57_RS00595
• Genome accession: NZ_CP162268
• Coordinates: 102597..103067 (+)
• Length: 156 a.a.
• NCBI ID: WP_105137563.1
• Uniprot ID: -
• Organism: Streptococcus sp. ZY1909104
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 97597..108067

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1F57_RS00585 (AB1F57_00585)	-	99235..100491 (-)	1257	WP_174853283.1	ISL3 family transposase	-
AB1F57_RS00590 (AB1F57_00590)	-	100822..102078 (-)	1257	WP_172022804.1	ISL3 family transposase	-
AB1F57_RS00595 (AB1F57_00595)	comX/sigX	102597..103067 (+)	471	WP_105137563.1	transcriptional regulator	Regulator
AB1F57_RS00600 (AB1F57_00600)	-	103198..103551 (+)	354	WP_170239296.1	DUF1033 family protein	-
AB1F57_RS00605 (AB1F57_00605)	comYA	103646..104596 (+)	951	WP_170239295.1	competence type IV pilus ATPase ComGA	Machinery gene
AB1F57_RS00610 (AB1F57_00610)	comYB	104508..105545 (+)	1038	WP_367986322.1	competence type IV pilus assembly protein ComGB	Machinery gene
AB1F57_RS00615 (AB1F57_00615)	comYC	105546..105842 (+)	297	WP_105137567.1	competence type IV pilus major pilin ComGC	Machinery gene
AB1F57_RS00620 (AB1F57_00620)	comGD/cglD	105808..106233 (+)	426	WP_170239294.1	competence type IV pilus minor pilin ComGD	Machinery gene
AB1F57_RS00625 (AB1F57_00625)	comYE	106205..106498 (+)	294	WP_367985900.1	competence type IV pilus minor pilin ComGE	Machinery gene
AB1F57_RS00630 (AB1F57_00630)	comYF	106485..106919 (+)	435	WP_170239292.1	competence type IV pilus minor pilin ComGF	Machinery gene
AB1F57_RS00635 (AB1F57_00635)	comGG	106897..107499 (+)	603	WP_167785080.1	competence type IV pilus minor pilin ComGG	-

Sequence

Protein

• Length: 156 a.a.
• Molecular weight: 19276.12 Da
• Isoelectric Point: 8.4567

>NTDB_id=1024674 AB1F57_RS00595 WP_105137563.1 102597..103067(+) (comX/sigX) [Streptococcus sp. ZY1909104]
MQFEKIYFEVQGIVHRARKDFYVKLWEREDWDQEGMLVLYKLLCSFPELEEDKDKLCSYFKVQFRNRVRDVVRRQESHKR
KFDRMPHEDIHDLSHLVKSPGLLNDDFIVLRDMLRTYRSQLSPEQLEKYEKLITGQSFHGRRNMIRELQDYLRDFK

Nucleotide

• Length: 471 bp

>NTDB_id=1024674 AB1F57_RS00595 WP_105137563.1 102597..103067(+) (comX/sigX) [Streptococcus sp. ZY1909104]
ATGCAATTTGAAAAGATTTATTTTGAAGTTCAGGGGATTGTTCACCGCGCGCGTAAGGATTTCTACGTGAAGTTATGGGA
ACGTGAGGATTGGGACCAGGAGGGGATGTTGGTTCTATACAAATTACTATGCAGTTTTCCAGAATTGGAGGAAGATAAGG
ATAAGCTCTGCAGTTACTTTAAGGTTCAGTTCCGAAATCGTGTTCGGGATGTTGTGCGCAGGCAAGAAAGCCATAAGCGG
AAGTTTGACCGTATGCCCCATGAAGATATTCATGATTTGTCGCATCTAGTAAAGTCGCCGGGATTGTTAAATGACGATTT
TATTGTTTTGCGAGATATGTTGCGGACTTATAGAAGTCAGCTGTCGCCGGAACAGTTAGAAAAATACGAGAAGCTAATCA
CAGGTCAGAGTTTCCATGGGCGGAGGAATATGATACGTGAACTGCAAGACTACCTGCGAGATTTTAAGTAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX	Streptococcus suis D9	60.897	100	0.609
comX/sigX	Streptococcus suis isolate S10	60.256	100	0.603
comX/sigX	Streptococcus suis P1/7	60.256	100	0.603
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	49.032	99.359	0.487
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	49.032	99.359	0.487
comX/sigX	Streptococcus mutans UA159	44.805	98.718	0.442
comX	Streptococcus thermophilus LMG 18311	42.484	98.077	0.417
comX/sigX	Streptococcus salivarius strain HSISS4	42.484	98.077	0.417
comX	Streptococcus thermophilus LMD-9	42.484	98.077	0.417
comX	Streptococcus salivarius SK126	42.484	98.077	0.417
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	40.127	100	0.404
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	41.176	98.077	0.404
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	40.523	98.077	0.397
comX/comX2	Streptococcus pneumoniae R6	39.869	98.077	0.391
comX/comX2	Streptococcus pneumoniae Rx1	39.869	98.077	0.391
comX/comX1	Streptococcus pneumoniae Rx1	39.869	98.077	0.391
comX/comX2	Streptococcus pneumoniae D39	39.869	98.077	0.391
comX/comX1	Streptococcus pneumoniae D39	39.869	98.077	0.391
comX/comX1	Streptococcus pneumoniae R6	39.869	98.077	0.391
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	39.869	98.077	0.391
comX	Streptococcus sobrinus strain NIDR 6715-7	38.961	98.718	0.385
comX/comX1	Streptococcus pneumoniae TIGR4	39.735	96.795	0.385
comX/comX2	Streptococcus pneumoniae TIGR4	39.735	96.795	0.385
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	37.908	98.077	0.372