Detailed information NTG1024678

Bioinformatically predicted

Overview

• Name: comGD/cglD
• Type: Machinery gene
• Locus tag: AB1F57_RS00620
• Genome accession: NZ_CP162268
• Coordinates: 105808..106233 (+)
• Length: 141 a.a.
• NCBI ID: WP_170239294.1
• Uniprot ID: -
• Organism: Streptococcus sp. ZY1909104
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 100808..111233

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB1F57_RS00590 (AB1F57_00590)	-	100822..102078 (-)	1257	WP_172022804.1	ISL3 family transposase	-
AB1F57_RS00595 (AB1F57_00595)	comX/sigX	102597..103067 (+)	471	WP_105137563.1	transcriptional regulator	Regulator
AB1F57_RS00600 (AB1F57_00600)	-	103198..103551 (+)	354	WP_170239296.1	DUF1033 family protein	-
AB1F57_RS00605 (AB1F57_00605)	comYA	103646..104596 (+)	951	WP_170239295.1	competence type IV pilus ATPase ComGA	Machinery gene
AB1F57_RS00610 (AB1F57_00610)	comYB	104508..105545 (+)	1038	WP_367986322.1	competence type IV pilus assembly protein ComGB	Machinery gene
AB1F57_RS00615 (AB1F57_00615)	comYC	105546..105842 (+)	297	WP_105137567.1	competence type IV pilus major pilin ComGC	Machinery gene
AB1F57_RS00620 (AB1F57_00620)	comGD/cglD	105808..106233 (+)	426	WP_170239294.1	competence type IV pilus minor pilin ComGD	Machinery gene
AB1F57_RS00625 (AB1F57_00625)	comYE	106205..106498 (+)	294	WP_367985900.1	competence type IV pilus minor pilin ComGE	Machinery gene
AB1F57_RS00630 (AB1F57_00630)	comYF	106485..106919 (+)	435	WP_170239292.1	competence type IV pilus minor pilin ComGF	Machinery gene
AB1F57_RS00635 (AB1F57_00635)	comGG	106897..107499 (+)	603	WP_167785080.1	competence type IV pilus minor pilin ComGG	-
AB1F57_RS00640 (AB1F57_00640)	comYH	107550..108503 (+)	954	WP_367985901.1	class I SAM-dependent methyltransferase	Machinery gene
AB1F57_RS00645 (AB1F57_00645)	-	108552..109739 (+)	1188	WP_367985902.1	acetate kinase	-
AB1F57_RS00650 (AB1F57_00650)	-	109994..110545 (+)	552	WP_105137573.1	folate family ECF transporter S component	-

Sequence

Protein

• Length: 141 a.a.
• Molecular weight: 15703.90 Da
• Isoelectric Point: 8.4342

>NTDB_id=1024678 AB1F57_RS00620 WP_170239294.1 105808..106233(+) (comGD/cglD) [Streptococcus sp. ZY1909104]
MRKPKPLIQINNNAFTLLESLLVLFIVSFLALALSGSVQSAFRSVQETVFFWEFEELYKDSQRLAVNSQQEIHLQLTDSQ
LSNGHQSVQVPASIDVLTDQAIVFDKKGGNSSLAKLSFEAGGKTVSYQLYIGSGRYKKSEK

Nucleotide

• Length: 426 bp

>NTDB_id=1024678 AB1F57_RS00620 WP_170239294.1 105808..106233(+) (comGD/cglD) [Streptococcus sp. ZY1909104]
ATGAGAAAGCCAAAGCCTCTAATCCAGATAAATAATAATGCCTTTACTCTGCTAGAAAGTCTGTTGGTTCTTTTTATCGT
GAGCTTTCTTGCTCTGGCTTTGTCGGGTTCTGTCCAGTCGGCTTTTCGGTCGGTGCAGGAGACGGTTTTCTTCTGGGAGT
TTGAGGAGCTTTATAAAGATAGCCAGCGTCTGGCGGTCAACAGTCAGCAGGAAATCCATTTGCAACTGACGGATAGCCAA
CTGTCCAACGGTCATCAGTCCGTGCAGGTGCCTGCTAGTATCGATGTACTGACTGATCAGGCTATTGTTTTCGATAAAAA
AGGTGGGAATTCCTCGCTTGCCAAGCTGTCCTTTGAGGCGGGGGGAAAGACGGTGTCGTATCAATTATATATAGGGAGTG
GTCGTTATAAGAAATCGGAAAAATAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD/cglD	Streptococcus mitis NCTC 12261	51.128	94.326	0.482
comGD/cglD	Streptococcus pneumoniae TIGR4	54.4	88.652	0.482
comGD/cglD	Streptococcus mitis SK321	54.4	88.652	0.482
comGD/cglD	Streptococcus pneumoniae R6	53.6	88.652	0.475
comGD/cglD	Streptococcus pneumoniae Rx1	53.6	88.652	0.475
comGD/cglD	Streptococcus pneumoniae D39	53.6	88.652	0.475
comYD	Streptococcus gordonii str. Challis substr. CH1	48.12	94.326	0.454
comYD	Streptococcus mutans UA140	47.287	91.489	0.433
comYD	Streptococcus mutans UA159	47.287	91.489	0.433
comGD	Lactococcus lactis subsp. cremoris KW2	39.535	91.489	0.362