Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | DQN42_RS01755 | Genome accession | NZ_LS483436 |
| Coordinates | 342794..343840 (+) | Length | 348 a.a. |
| NCBI ID | WP_003078361.1 | Uniprot ID | - |
| Organism | Streptococcus intermedius strain NCTC11324 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 337794..348840
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DQN42_RS01725 (NCTC11324_00349) | tsaE | 339182..339622 (+) | 441 | WP_003078375.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| DQN42_RS01730 (NCTC11324_00350) | - | 339615..340136 (+) | 522 | WP_003073848.1 | GNAT family N-acetyltransferase | - |
| DQN42_RS01735 (NCTC11324_00351) | brpA | 340144..341247 (+) | 1104 | WP_003078359.1 | biofilm formation/cell division transcriptional regulator BrpA | - |
| DQN42_RS01740 (NCTC11324_00352) | - | 341290..341577 (-) | 288 | WP_003078430.1 | hypothetical protein | - |
| DQN42_RS01745 (NCTC11324_00353) | - | 341587..341997 (-) | 411 | WP_003073842.1 | HIT family protein | - |
| DQN42_RS01750 (NCTC11324_00354) | pptA | 342066..342797 (+) | 732 | WP_003073841.1 | ABC transporter ATP-binding protein | Regulator |
| DQN42_RS01755 (NCTC11324_00355) | pptB | 342794..343840 (+) | 1047 | WP_003078361.1 | ABC transporter permease | Regulator |
| DQN42_RS01760 (NCTC11324_00356) | ccrZ | 343891..344688 (+) | 798 | WP_003073837.1 | cell cycle regulator CcrZ | - |
| DQN42_RS01765 (NCTC11324_00357) | trmB | 344685..345320 (+) | 636 | WP_003078354.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| DQN42_RS01770 (NCTC11324_00358) | - | 345721..346413 (+) | 693 | WP_003073834.1 | VIT family protein | - |
| DQN42_RS01775 (NCTC11324_00359) | rimP | 346625..347113 (+) | 489 | WP_003078411.1 | ribosome maturation factor RimP | - |
| DQN42_RS01780 (NCTC11324_00360) | nusA | 347165..348358 (+) | 1194 | WP_003078357.1 | transcription termination factor NusA | - |
| DQN42_RS01785 (NCTC11324_00361) | rnpM | 348369..348665 (+) | 297 | WP_003078278.1 | RNase P modulator RnpM | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 40787.15 Da Isoelectric Point: 10.4104
>NTDB_id=1024676 DQN42_RS01755 WP_003078361.1 342794..343840(+) (pptB) [Streptococcus intermedius strain NCTC11324]
MKEVFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFSGFLAVQYSQLLRNFPKNHLPIILALAVLLVFLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQKQMCSSYLLWSVFQTAILLLAAPLLLALGLPFWGWFILVFFMLIAKWFLFLKKSRRFYQGAG
INWGYLIDYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNMFLRSYLRNGDFLALTMRLLFLS
LLGIGLLGQSWIAAVFVILLNYLLLFQLTALYNAFDYQYLTFLFPLEIGLKLKGVRQVIVLVGYSVLLVETIMALLFFQD
RVALLFMVGVTLLLYFFYLPVKLKSLVD
MKEVFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFSGFLAVQYSQLLRNFPKNHLPIILALAVLLVFLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQKQMCSSYLLWSVFQTAILLLAAPLLLALGLPFWGWFILVFFMLIAKWFLFLKKSRRFYQGAG
INWGYLIDYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNMFLRSYLRNGDFLALTMRLLFLS
LLGIGLLGQSWIAAVFVILLNYLLLFQLTALYNAFDYQYLTFLFPLEIGLKLKGVRQVIVLVGYSVLLVETIMALLFFQD
RVALLFMVGVTLLLYFFYLPVKLKSLVD
Nucleotide
Download Length: 1047 bp
>NTDB_id=1024676 DQN42_RS01755 WP_003078361.1 342794..343840(+) (pptB) [Streptococcus intermedius strain NCTC11324]
ATGAAAGAAGTGTTTCAAAAGCGCAAGCAAGTATTTCGCAATCAATGTTTGAAATATTCACGCTATGTTTTTAACGATCA
TTTTGTTCTATTTTTATTAGTTTTTAGTGGTTTTTTAGCTGTTCAATATAGTCAACTGTTGCGAAATTTTCCTAAAAATC
ACCTGCCAATTATTCTTGCTTTAGCAGTTCTTTTGGTGTTCTTGTTGCCTTTGGGAAGAATTGCAACGTATATGGAAAAG
CCAGATAGTCTATTTTTGTTGGTCAAAGAAGAAGAATTAAAAAGTTATTTACAAAAACAAATGTGTTCATCTTATCTATT
ATGGAGTGTATTTCAAACGGCTATTCTATTACTAGCAGCGCCACTCCTTTTGGCGCTAGGATTACCATTTTGGGGATGGT
TTATTCTTGTATTTTTTATGTTAATAGCAAAATGGTTTCTATTTTTGAAAAAGAGCCGAAGATTTTATCAAGGAGCAGGC
ATAAATTGGGGCTATCTCATTGACTACGAAGAGAGACGAAAGCAGACAATCTTGCGTTTCTTTGCTCTATTTACCAATGT
AAAAGGAATCTCCAATAGCGTGAAACGCCGAGCCTATCTTGATGGTTTGACAAATATTTTGCCAAAAAGGCAATCAACCA
CTTGGCAGAATATGTTTTTACGCTCTTATTTGCGAAATGGTGATTTTCTGGCTTTGACCATGCGGTTGCTATTTCTATCT
CTTTTAGGAATTGGCTTGCTCGGTCAATCTTGGATTGCGGCTGTTTTTGTGATACTGTTGAATTATCTTTTGCTATTTCA
ATTGACTGCTTTGTACAACGCTTTTGATTATCAATATTTGACATTCTTATTTCCTCTAGAAATCGGATTAAAGTTAAAGG
GTGTGAGACAAGTGATTGTTCTTGTTGGTTACAGTGTGCTGTTAGTTGAAACAATTATGGCGTTGCTATTTTTCCAAGAT
AGAGTTGCACTGCTTTTCATGGTAGGAGTTACACTATTGCTTTATTTTTTCTATTTACCAGTTAAATTAAAAAGTTTGGT
TGACTAA
ATGAAAGAAGTGTTTCAAAAGCGCAAGCAAGTATTTCGCAATCAATGTTTGAAATATTCACGCTATGTTTTTAACGATCA
TTTTGTTCTATTTTTATTAGTTTTTAGTGGTTTTTTAGCTGTTCAATATAGTCAACTGTTGCGAAATTTTCCTAAAAATC
ACCTGCCAATTATTCTTGCTTTAGCAGTTCTTTTGGTGTTCTTGTTGCCTTTGGGAAGAATTGCAACGTATATGGAAAAG
CCAGATAGTCTATTTTTGTTGGTCAAAGAAGAAGAATTAAAAAGTTATTTACAAAAACAAATGTGTTCATCTTATCTATT
ATGGAGTGTATTTCAAACGGCTATTCTATTACTAGCAGCGCCACTCCTTTTGGCGCTAGGATTACCATTTTGGGGATGGT
TTATTCTTGTATTTTTTATGTTAATAGCAAAATGGTTTCTATTTTTGAAAAAGAGCCGAAGATTTTATCAAGGAGCAGGC
ATAAATTGGGGCTATCTCATTGACTACGAAGAGAGACGAAAGCAGACAATCTTGCGTTTCTTTGCTCTATTTACCAATGT
AAAAGGAATCTCCAATAGCGTGAAACGCCGAGCCTATCTTGATGGTTTGACAAATATTTTGCCAAAAAGGCAATCAACCA
CTTGGCAGAATATGTTTTTACGCTCTTATTTGCGAAATGGTGATTTTCTGGCTTTGACCATGCGGTTGCTATTTCTATCT
CTTTTAGGAATTGGCTTGCTCGGTCAATCTTGGATTGCGGCTGTTTTTGTGATACTGTTGAATTATCTTTTGCTATTTCA
ATTGACTGCTTTGTACAACGCTTTTGATTATCAATATTTGACATTCTTATTTCCTCTAGAAATCGGATTAAAGTTAAAGG
GTGTGAGACAAGTGATTGTTCTTGTTGGTTACAGTGTGCTGTTAGTTGAAACAATTATGGCGTTGCTATTTTTCCAAGAT
AGAGTTGCACTGCTTTTCATGGTAGGAGTTACACTATTGCTTTATTTTTTCTATTTACCAGTTAAATTAAAAAGTTTGGT
TGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus thermophilus LMD-9 |
47.414 |
100 |
0.474 |
| pptB | Streptococcus salivarius strain HSISS4 |
46.552 |
100 |
0.466 |