TA loci of Escherichia coli strain USDA-ARS-USMARC-50748
Number of TA loci:
0;
22
| TA ID | Related MGEs | Organism (replicon) | Genome accession | Toxin | Antitoxin | Family/Domain |
|---|---|---|---|---|---|---|
| - | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS01590 (hicA) | N1709_RS01595 (hicB) | hicAB/- | |
| - | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS01715 (ataT) | N1709_RS01710 (ataR) | ataRT/DUF1778(antitoxin) | |
| - | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS03295 (yhaV) | N1709_RS03300 (prlF) | prlF-yhaV (relBE)/YhaV-PrlF | |
| - | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS05215 (mazF) | N1709_RS05210 (mazE) | mazEF/PRK09907-MazE | |
| - | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS06890 (vapC) | N1709_RS06885 (vapB) | vapBC/VapC-VagC | |
| Prophage | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS11995 (relE) | N1709_RS11990 (relB) | relBE/ParE-RelB | |
| GI | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS12445 (hipA) | N1709_RS12440 (hipB) | hipBA/HipA-HipB | |
| IS/Tn | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS12840 (hicA) | N1709_RS12835 (hicB) | hicAB/UPF0150(antitoxin) | |
| - | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS17910 (Hha) | N1709_RS17905 (TomB) | Hha-TomB/- | |
| - | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS18080 (itaT) | N1709_RS18075 (itaR) | itaRT/DUF1778(antitoxin) | |
| GI | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS19240 (yafQ) | N1709_RS19235 (dinJ) | DinJ-YafQ (relBE)/YafQ-RelB | |
| Prophage | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS21040 (sanaT) | N1709_RS21045 (sanaA) | sanaTA/AbiEii-DUF6088 | |
| - | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS21445 (chpB) | N1709_RS21450 (chpS) | chpSB/PRK09812-ChpS | |
| - | Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) | NZ_CP104117 | N1709_RS23195 (higB) | N1709_RS23190 (higA) | higBA (relBE)/HTH(antitoxin) | |
| Plasmid | Escherichia coli strain USDA-ARS-USMARC-50748 (plasmid pEc1-50748) | NZ_CP104118 | N1709_RS24325 (relE) | N1709_RS24330 (relB) | relBE/ParE-YafN | |
| Plasmid | Escherichia coli strain USDA-ARS-USMARC-50748 (plasmid pEc3-50748) | NZ_CP104120 | N1709_RS25210 (vagD) | N1709_RS25205 (vagC) | vagCD/VapC-VagC |