Escherichia coli strain USDA-ARS-USMARC-507481

TA loci of Escherichia coli strain USDA-ARS-USMARC-50748

Number of TA loci: experimental0; insolico22

TA ID Related MGEs Organism (replicon) Genome accession Toxin Antitoxin Family/Domain
in_silico TA257237 - Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS01590 (hicA) N1709_RS01595 (hicB) hicAB/-
in_silico TA257238 - Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS01715 (ataT) N1709_RS01710 (ataR) ataRT/DUF1778(antitoxin)
in_silico TA257239 - Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS03295 (yhaV) N1709_RS03300 (prlF) prlF-yhaV (relBE)/YhaV-PrlF
in_silico TA257241 - Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS05215 (mazF) N1709_RS05210 (mazE) mazEF/PRK09907-MazE
in_silico TA257242 - Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS06890 (vapC) N1709_RS06885 (vapB) vapBC/VapC-VagC
in_silico TA257248 Prophage Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS11995 (relE) N1709_RS11990 (relB) relBE/ParE-RelB
in_silico TA257249 GI Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS12445 (hipA) N1709_RS12440 (hipB) hipBA/HipA-HipB
in_silico TA257250 IS/Tn Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS12840 (hicA) N1709_RS12835 (hicB) hicAB/UPF0150(antitoxin)
in_silico TA257252 - Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS17910 (Hha) N1709_RS17905 (TomB) Hha-TomB/-
in_silico TA257253 - Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS18080 (itaT) N1709_RS18075 (itaR) itaRT/DUF1778(antitoxin)
in_silico TA257254 GI Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS19240 (yafQ) N1709_RS19235 (dinJ) DinJ-YafQ (relBE)/YafQ-RelB
in_silico TA257255 Prophage Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS21040 (sanaT) N1709_RS21045 (sanaA) sanaTA/AbiEii-DUF6088
in_silico TA257256 - Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS21445 (chpB) N1709_RS21450 (chpS) chpSB/PRK09812-ChpS
in_silico TA257258 - Escherichia coli strain USDA-ARS-USMARC-50748 (chromosome) NZ_CP104117 N1709_RS23195 (higB) N1709_RS23190 (higA) higBA (relBE)/HTH(antitoxin)
in_silico TA257259 Plasmid Escherichia coli strain USDA-ARS-USMARC-50748 (plasmid pEc1-50748) NZ_CP104118 N1709_RS24325 (relE) N1709_RS24330 (relB) relBE/ParE-YafN
in_silico TA257261 Plasmid Escherichia coli strain USDA-ARS-USMARC-50748 (plasmid pEc3-50748) NZ_CP104120 N1709_RS25210 (vagD) N1709_RS25205 (vagC) vagCD/VapC-VagC
experimentalExperimentally validated     insolicoBioinformatically predicted