MGE detailed information
MGE type: Genomic_island MGE length: 17899 bp
Accession: NZ_CP104117 Location: 3910297..3928195 Organism: Escherichia coli strain USDA-ARS-USMARC-50748 Replicon: chromosome
Accession: NZ_CP104117 Location: 3910297..3928195 Organism: Escherichia coli strain USDA-ARS-USMARC-50748 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1709_RS19200 (3905877) | 3905877..3906329 | - | 453 | WP_001059855.1 | GNAT family N-acetyltransferase | - |
| N1709_RS19205 (3906326) | 3906326..3907381 | - | 1056 | WP_001226183.1 | DNA polymerase IV | - |
| N1709_RS19210 (3907452) | 3907452..3908237 | - | 786 | WP_000207575.1 | putative lateral flagellar export/assembly protein LafU | - |
| N1709_RS19215 (3908209) | 3908209..3909921 | + | 1713 | Protein_3767 | flagellar biosynthesis protein FlhA | - |
| N1709_RS19220 (3910026) | 3910026..3910304 | + | 279 | WP_000598760.1 | type II toxin-antitoxin system HicA family toxin | - |
| N1709_RS19225 (3910297) | 3910297..3910653 | + | 357 | WP_001030483.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| N1709_RS19230 (3910710) | 3910710..3911483 | - | 774 | WP_000543895.1 | hypothetical protein | VF |
| N1709_RS19235 (3911669) | 3911669..3911929 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| N1709_RS19240 (3911932) | 3911932..3912210 | + | 279 | WP_000615976.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| N1709_RS19245 (3912366) | 3912366..3913106 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| N1709_RS19250 (3913077) | 3913077..3913844 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| N1709_RS19255 (3914050) | 3914050..3914628 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| N1709_RS19260 (3914868) | 3914868..3917312 | + | 2445 | WP_000973081.1 | Acyl-coenzyme A dehydrogenase | VF |
| N1709_RS19265 (3917355) | 3917355..3917801 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| N1709_RS19270 (3917982) | 3917982..3918752 | + | 771 | WP_001118038.1 | 2-oxoglutaramate amidase | - |
| N1709_RS19275 (3918794) | 3918794..3919930 | - | 1137 | Protein_3779 | ISAs1 family transposase ISEc1 | Transposase |
| N1709_RS19280 (3920033) | 3920033..3921159 | - | 1127 | Protein_3780 | ISAs1 family transposase ISEc26 | Transposase |
| N1709_RS19285 (3921240) | 3921240..3921425 | + | 186 | WP_122985422.1 | hypothetical protein | - |
| N1709_RS19290 (3921340) | 3921340..3921603 | - | 264 | WP_077698038.1 | dCTP deaminase | - |
| N1709_RS19295 (3922255) | 3922255..3923169 | - | 915 | Protein_3783 | Protein RhsD | VF |
| N1709_RS19300 (3923205) | 3923205..3925432 | - | 2228 | Protein_3784 | Protein RhsD | VF |
| N1709_RS19305 (3925546) | 3925546..3925740 | - | 195 | WP_000990552.1 | DUF3969 family protein | - |
| N1709_RS19310 (3926006) | 3926006..3926458 | - | 453 | WP_000960005.1 | hypothetical protein | - |
| N1709_RS19315 (3926488) | 3926488..3927624 | - | 1137 | Protein_3787 | ISAs1 family transposase ISEc1 | Transposase |
| N1709_RS19320 (3927803) | 3927803..3928195 | - | 393 | WP_001101835.1 | hypothetical protein | - |
| N1709_RS19325 (3928173) | 3928173..3932345 | - | 4173 | WP_260252269.1 | RHS element core protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|