MGE detailed information
MGE type: Mobilizable plasmid MGE length: 48650 bp
Accession: NZ_CP104120 Location: 1..48650 Organism: Escherichia coli strain USDA-ARS-USMARC-50748 Replicon: plasmid pEc3-50748
Accession: NZ_CP104120 Location: 1..48650 Organism: Escherichia coli strain USDA-ARS-USMARC-50748 Replicon: plasmid pEc3-50748
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1709_RS25135 (N1709_25135) | 319..627 | - | 309 | Protein_0 | replication initiation protein | - |
| N1709_RS25145 (N1709_25145) | 1486..2973 | - | 1488 | Protein_2 | group II intron reverse transcriptase/maturase | - |
| N1709_RS25150 (N1709_25150) | 3379..3810 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| N1709_RS25155 (N1709_25155) | 3810..5081 | + | 1272 | WP_001754953.1 | Y-family DNA polymerase | - |
| N1709_RS25160 (N1709_25160) | 5163..6137 | - | 975 | WP_000064119.1 | ParB family protein | - |
| N1709_RS25165 (N1709_25165) | 6137..7342 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| N1709_RS25170 (N1709_25170) | 7757..8026 | + | 270 | WP_000339857.1 | hypothetical protein | - |
| N1709_RS25175 (N1709_25175) | 8203..9069 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| N1709_RS25180 (N1709_25180) | 9599..9703 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| N1709_RS25185 (N1709_25185) | 9832..10089 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| N1709_RS25190 (N1709_25190) | 10147..10923 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| N1709_RS25195 (N1709_25195) | 10920..11663 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| N1709_RS25200 (N1709_25200) | 11714..12064 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| N1709_RS25205 (N1709_25205) | 12638..12868 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| N1709_RS25210 (N1709_25210) | 12865..13281 | + | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| N1709_RS25215 (N1709_25215) | 13485..14341 | + | 857 | Protein_16 | IS3 family transposase ISEc15 | Transposase |
| N1709_RS25220 (N1709_25220) | 14623..15699 | + | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| N1709_RS25225 (N1709_25225) | 15719..15820 | - | 102 | Protein_18 | Tn3 family transposase | - |
| N1709_RS25230 (N1709_25230) | 16340..16423 | + | 84 | Protein_19 | SOS response-associated peptidase | - |
| N1709_RS25235 (N1709_25235) | 16754..17188 | - | 435 | WP_000429836.1 | IS607 family transposase ISChh1 | Transposase |
| N1709_RS25240 (N1709_25240) | 17260..17610 | + | 351 | WP_001294663.1 | mercuric transport protein MerT | - |
| N1709_RS25245 (N1709_25245) | 17624..17899 | + | 276 | WP_000732292.1 | mercury resistance system periplasmic binding protein MerP | - |
| N1709_RS25250 (N1709_25250) | 17935..18357 | + | 423 | WP_001340589.1 | organomercurial transporter MerC | - |
| N1709_RS25255 (N1709_25255) | 18409..20103 | + | 1695 | WP_000105636.1 | mercury(II) reductase | - |
| N1709_RS25260 (N1709_25260) | 20121..20483 | + | 363 | WP_001277456.1 | mercury resistance co-regulator MerD | - |
| N1709_RS25265 (N1709_25265) | 20480..20716 | + | 237 | WP_000993386.1 | broad-spectrum mercury transporter MerE | - |
| N1709_RS25270 (N1709_25270) | 20752..21420 | + | 669 | WP_001300294.1 | putative signaling protein | VF |
| N1709_RS25275 (N1709_25275) | 21495..22745 | + | 1251 | Protein_28 | transposase | - |
| N1709_RS25280 (N1709_25280) | 22810..23514 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N1709_RS25285 (N1709_25285) | 23740..25233 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| N1709_RS25290 (N1709_25290) | 25444..25668 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| N1709_RS25295 (N1709_25295) | 25665..26402 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| N1709_RS25300 (N1709_25300) | 26888..27028 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| N1709_RS25305 (N1709_25305) | 27034..27738 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| N1709_RS25310 (N1709_25310) | 27763..28551 | + | 789 | WP_260253102.1 | DUF3363 domain-containing protein | - |
| N1709_RS25315 (N1709_25315) | 28768..29982 | + | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| N1709_RS25320 (N1709_25320) | 30010..30315 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| N1709_RS25325 (N1709_25325) | 30427..30615 | + | 189 | Protein_38 | IS91 family transposase | - |
| N1709_RS25330 (N1709_25330) | 30582..31781 | - | 1200 | WP_000804063.1 | Tetracycline resistance protein, class C | ARG |
| N1709_RS25335 (N1709_25335) | 31887..32537 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| N1709_RS25340 (N1709_25340) | 32569..32811 | - | 243 | WP_000844627.1 | transposase | - |
| N1709_RS25345 (N1709_25345) | 33117..33953 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| N1709_RS25350 (N1709_25350) | 33953..34756 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| N1709_RS25355 (N1709_25355) | 34817..35632 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| N1709_RS25360 (N1709_25360) | 35794..36654 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| N1709_RS25365 (N1709_25365) | 36837..37394 | - | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| N1709_RS25370 (N1709_25370) | 37556..40561 | + | 3006 | WP_001143775.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| N1709_RS25375 (N1709_25375) | 40626..41276 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| N1709_RS25380 (N1709_25380) | 41382..42581 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| N1709_RS25385 (N1709_25385) | 42613..43497 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| N1709_RS25390 (N1709_25390) | 43635..44027 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| N1709_RS25395 (N1709_25395) | 44031..45782 | + | 1752 | Protein_52 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| N1709_RS25400 (N1709_25400) | 45815..46048 | - | 234 | Protein_53 | transposase | - |
| N1709_RS25405 (N1709_25405) | 46630..47016 | + | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| N1709_RS25410 (N1709_25410) | 47156..48073 | - | 918 | Protein_55 | IS5 family transposase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|