MGE detailed information
MGE type: Prophage MGE length: 45449 bp
Accession: NZ_CP104117 Location: 4296193..4341641 Organism: Escherichia coli strain USDA-ARS-USMARC-50748 Replicon: chromosome
Accession: NZ_CP104117 Location: 4296193..4341641 Organism: Escherichia coli strain USDA-ARS-USMARC-50748 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1709_RS20985 (4293798) | 4293798..4294523 | - | 726 | WP_000066557.1 | type 1 fimbria chaperone FimC | - |
| N1709_RS20990 (4294560) | 4294560..4295099 | - | 540 | WP_000824114.1 | fimbrial protein | - |
| N1709_RS20995 (4295164) | 4295164..4295712 | - | 549 | WP_000695561.1 | type 1 fimbrial major subunit FimA | - |
| N1709_RS21000 (4296193) | 4296193..4296789 | - | 597 | WP_000044711.1 | ISKra4 family transposase ISCep1 | VF |
| N1709_RS21005 (4297267) | 4297267..4297869 | - | 603 | WP_000790583.1 | ISKra4 family transposase ISCep1 | VF |
| N1709_RS21010 (4299325) | 4299325..4300041 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| N1709_RS21015 (4300061) | 4300061..4301167 | + | 1107 | WP_001298927.1 | N-acetylneuraminate epimerase | - |
| N1709_RS21020 (4301232) | 4301232..4302212 | + | 981 | WP_000991446.1 | sialate O-acetylesterase | - |
| N1709_RS21025 (4302220) | 4302220..4302870 | - | 651 | WP_001037963.1 | HNH endonuclease | - |
| N1709_RS21030 (4303007) | 4303007..4303150 | + | 144 | Protein_4120 | HNH endonuclease | - |
| N1709_RS21035 (4303249) | 4303249..4303434 | + | 186 | WP_000066585.1 | hypothetical protein | - |
| N1709_RS21040 (4303472) | 4303472..4304419 | - | 948 | WP_000342497.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| N1709_RS21045 (4304412) | 4304412..4304807 | - | 396 | WP_000152739.1 | DUF6088 family protein | Antitoxin Detail |
| N1709_RS21050 (4304877) | 4304877..4305710 | - | 834 | WP_001192741.1 | DUF4942 domain-containing protein | - |
| N1709_RS21055 (4306016) | 4306016..4307572 | + | 1557 | WP_000202816.1 | type I restriction-modification system subunit M | - |
| N1709_RS21060 (4307569) | 4307569..4308735 | + | 1167 | WP_001293040.1 | restriction endonuclease subunit S | - |
| N1709_RS21065 (4308857) | 4308857..4311973 | + | 3117 | WP_000149674.1 | HsdR family type I site-specific deoxyribonuclease | - |
| N1709_RS21070 (4312215) | 4312215..4312550 | - | 336 | WP_001405510.1 | hypothetical protein | - |
| N1709_RS21075 (4312756) | 4312756..4315089 | - | 2334 | WP_196109179.1 | primase-like DNA-binding domain-containing protein | - |
| N1709_RS21080 (4315104) | 4315104..4315424 | - | 321 | WP_000856729.1 | DUF5375 domain-containing protein | - |
| N1709_RS21085 (4315560) | 4315560..4316015 | - | 456 | WP_000459319.1 | hypothetical protein | - |
| N1709_RS21090 (4316008) | 4316008..4316295 | - | 288 | WP_001244670.1 | hypothetical protein | - |
| N1709_RS21095 (4316288) | 4316288..4316887 | - | 600 | WP_042099441.1 | host cell division inhibitor Icd-like protein | - |
| N1709_RS21100 (4316884) | 4316884..4317150 | - | 267 | WP_001149160.1 | AlpA family transcriptional regulator | - |
| N1709_RS21105 (4317702) | 4317702..4318436 | + | 735 | WP_001600374.1 | hypothetical protein | - |
| N1709_RS21110 (4318433) | 4318433..4318933 | + | 501 | WP_196109180.1 | ogr/Delta-like zinc finger family protein | - |
| N1709_RS21115 (4319007) | 4319007..4319579 | + | 573 | WP_196109181.1 | phage polarity suppression protein | - |
| N1709_RS21120 (4319632) | 4319632..4319811 | + | 180 | WP_077778391.1 | hypothetical protein | - |
| N1709_RS21125 (4319977) | 4319977..4321056 | + | 1080 | WP_001100521.1 | hypothetical protein | - |
| N1709_RS21130 (4321060) | 4321060..4321593 | + | 534 | WP_000643647.1 | hypothetical protein | - |
| N1709_RS21135 (4321544) | 4321544..4322554 | + | 1011 | WP_196109182.1 | hypothetical protein | - |
| N1709_RS21140 (4322609) | 4322609..4323874 | - | 1266 | WP_001522431.1 | Prophage integrase IntA ; Integrase | Integrase |
| N1709_RS21145 (4324202) | 4324202..4325416 | + | 1215 | WP_260252274.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| N1709_RS21150 (4325480) | 4325480..4326403 | + | 924 | WP_194500953.1 | abortive phage resistance protein | - |
| N1709_RS21155 (4326445) | 4326445..4326870 | - | 426 | WP_260252275.1 | endonuclease VII domain-containing protein | - |
| N1709_RS21160 (4326843) | 4326843..4327142 | - | 300 | WP_029039477.1 | hypothetical protein | - |
| N1709_RS21165 (4327126) | 4327126..4327551 | - | 426 | WP_260252276.1 | hypothetical protein | - |
| N1709_RS21170 (4327570) | 4327570..4328079 | - | 510 | WP_260252277.1 | HNH endonuclease signature motif containing protein | - |
| N1709_RS21175 (4328096) | 4328096..4329091 | - | 996 | WP_260252278.1 | capsid protein | - |
| N1709_RS21180 (4329331) | 4329331..4329933 | - | 603 | WP_063854202.1 | hypothetical protein | - |
| N1709_RS21185 (4330048) | 4330048..4330728 | - | 681 | WP_111732378.1 | hypothetical protein | - |
| N1709_RS21190 (4330732) | 4330732..4330971 | - | 240 | WP_000047581.1 | hypothetical protein | - |
| N1709_RS21195 (4330984) | 4330984..4331220 | - | 237 | WP_260252279.1 | hypothetical protein | - |
| N1709_RS21200 (4331217) | 4331217..4331780 | - | 564 | WP_260252280.1 | hypothetical protein | - |
| N1709_RS21205 (4331777) | 4331777..4331953 | - | 177 | WP_000187175.1 | hypothetical protein | - |
| N1709_RS21210 (4331950) | 4331950..4332159 | - | 210 | WP_000167304.1 | hypothetical protein | - |
| N1709_RS21215 (4332156) | 4332156..4332590 | - | 435 | WP_260252281.1 | hypothetical protein | - |
| N1709_RS21220 (4332628) | 4332628..4334472 | - | 1845 | WP_260252282.1 | DEAD/DEAH box helicase | - |
| N1709_RS21225 (4335730) | 4335730..4336305 | - | 576 | WP_001258716.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| N1709_RS21230 (4337282) | 4337282..4338196 | + | 915 | WP_260252283.1 | hypothetical protein | - |
| N1709_RS21240 (4338990) | 4338990..4340009 | + | 1020 | WP_001406584.1 | NADPH-dependent aldehyde reductase Ahr | - |
| N1709_RS21245 (4340139) | 4340139..4341641 | + | 1503 | WP_001406585.1 | DUF853 domain-containing protein | - |
| N1709_RS21250 (4341760) | 4341760..4342842 | - | 1083 | WP_001295681.1 | LPS export ABC transporter permease LptG | - |
| N1709_RS21255 (4342842) | 4342842..4343942 | - | 1101 | WP_000584114.1 | LPS export ABC transporter permease LptF | - |
| N1709_RS21260 (4344005) | 4344005..4344055 | - | 51 | WP_211180521.1 | protein YtgA | - |
| N1709_RS21265 (4344209) | 4344209..4345720 | + | 1512 | WP_000397144.1 | leucyl aminopeptidase | - |
| N1709_RS21270 (4345854) | 4345854..4346297 | + | 444 | WP_000786399.1 | DNA polymerase III subunit chi | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|