MGE detailed information
MGE type: Genomic_island MGE length: 16090 bp
Accession: NZ_CP104117 Location: 2507108..2523197 Organism: Escherichia coli strain USDA-ARS-USMARC-50748 Replicon: chromosome
Accession: NZ_CP104117 Location: 2507108..2523197 Organism: Escherichia coli strain USDA-ARS-USMARC-50748 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| N1709_RS12440 (2507108) | 2507108..2507374 | + | 267 | WP_001296726.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| N1709_RS12445 (2507374) | 2507374..2508696 | + | 1323 | WP_001125455.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| N1709_RS12450 (2509008) | 2509008..2509216 | + | 209 | Protein_2438 | AraC family transcriptional regulator | - |
| N1709_RS12455 (2509650) | 2509650..2510213 | + | 564 | WP_001296758.1 | Type-1 fimbrial protein, A chain | VF |
| N1709_RS12460 (2510574) | 2510574..2511284 | + | 711 | WP_001195166.1 | Chaperone protein FocC | VF |
| N1709_RS12465 (2511326) | 2511326..2513977 | + | 2652 | WP_001330903.1 | Outer membrane usher protein FimD | VF |
| N1709_RS12470 (2513991) | 2513991..2514521 | + | 531 | WP_260252208.1 | Protein FimF | VF |
| N1709_RS12475 (2514534) | 2514534..2515037 | + | 504 | WP_000825461.1 | Protein FimG | VF |
| N1709_RS12480 (2515096) | 2515096..2516010 | + | 915 | WP_000520669.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| N1709_RS12485 (2516344) | 2516344..2518623 | + | 2280 | WP_000726700.1 | acid resistance putative oxidoreductase YdeP | - |
| N1709_RS12490 (2518871) | 2518871..2519068 | + | 198 | WP_000543389.1 | two-component system connector SafA | - |
| N1709_RS12495 (2519143) | 2519143..2519904 | + | 762 | WP_000060480.1 | acid stress response transcriptional regulator YdeO | - |
| N1709_RS12500 (2520306) | 2520306..2521988 | + | 1683 | WP_260252209.1 | sulfatase | - |
| N1709_RS12505 (2522040) | 2522040..2523197 | + | 1158 | WP_032219744.1 | anaerobic sulfatase maturase | - |
| N1709_RS12510 (2523163) | 2523163..2523285 | - | 123 | WP_120795387.1 | protein YneP | - |
| N1709_RS12515 (2523488) | 2523488..2525173 | + | 1686 | WP_000628544.1 | ABC transporter ATP-binding protein/permease | - |
| N1709_RS12520 (2525211) | 2525211..2527583 | + | 2373 | WP_000832498.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|