NC_012580305869..409778

MGE detailed information

MGE type: Genomic_island        MGE length: 103910 bp
Accession: NC_012580        Location: 305869..409778         Organism: Vibrio cholerae M66-2       Replicon: chromosome II


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
VCM66_RS14635 () 301660..302811 + 1152 WP_001018595.1 site-specific integrase -
VCM66_RS14640 () 302857..303837 + 981 WP_000019370.1 IS5-like element ISVch5 family transposase -
VCM66_RS14645 () 304113..305348 + 1236 WP_001894604.1 hypothetical protein -
VCM66_RS14650 () 305869..306399 + 531 WP_000237645.1 type VI secretion system PAAR protein -
VCM66_RS14655 () 306399..307070 + 672 WP_000132861.1 hypothetical protein -
VCM66_RS19530 () 307195..307422 + 228 WP_001911595.1 hypothetical protein -
VCM66_RS14665 () 307691..309619 + 1929 WP_001121779.1 threonine--tRNA ligase -
VCM66_RS14670 () 309623..310174 + 552 WP_001894072.1 translation initiation factor IF-3 -
VCM66_RS14675 () 310278..310472 + 195 WP_001885060.1 50S ribosomal protein L35 -
VCM66_RS14680 () 310514..310867 + 354 WP_001138366.1 50S ribosomal protein L20 -
VCM66_RS14685 () 310949..311911 - 963 WP_000841995.1 IS91 family transposase ISAzo26 Transposase
VCM66_RS14695 () 312669..313064 + 396 WP_000046952.1 hypothetical protein -
VCM66_RS19535 () 313423..313518 + 96 WP_001907607.1 DUF645 family protein -
VCM66_RS14700 () 313730..314089 + 360 WP_001071529.1 VOC family protein -
VCM66_RS14705 () 314242..314709 + 468 WP_001289288.1 OsmC family protein -
VCM66_RS18665 () 315178..315288 + 111 WP_071908335.1 DUF3265 domain-containing protein -
VCM66_RS14710 () 315473..315654 + 182 Protein_263 DUF645 family protein -
VCM66_RS19540 () 315851..316969 + 1119 WP_000355719.1 hypothetical protein -
VCM66_RS14720 () 317111..317587 + 477 WP_001047183.1 GNAT family N-acetyltransferase -
VCM66_RS14730 () 317883..318062 + 180 WP_001889238.1 DUF645 family protein -
VCM66_RS14735 () 318256..318771 + 516 WP_000343784.1 dTDP-fucosamine acetyltransferase VF
VCM66_RS14740 () 318907..319422 + 516 WP_001201509.1 lipocalin family protein -
VCM66_RS14745 () 319565..320101 + 537 WP_000644491.1 nucleotidyltransferase family protein -
VCM66_RS18685 () 320570..320680 + 111 WP_071908335.1 DUF3265 domain-containing protein -
VCM66_RS14750 () 320893..321045 + 153 WP_001884520.1 DUF645 family protein -
VCM66_RS14755 () 321245..321523 - 279 WP_000578476.1 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family Toxin Detail
VCM66_RS14760 () 321520..321804 - 285 WP_000381183.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
VCM66_RS14765 () 321980..322279 - 300 WP_000802136.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCM66_RS14770 () 322276..322518 - 243 WP_001107719.1 type II toxin-antitoxin system ParD family antitoxin Antitoxin Detail
VCM66_RS18700 () 322937..323014 + 78 WP_071908337.1 DUF645 family protein -
VCM66_RS19545 () 323018..323044 + 27 Protein_277 hypothetical protein -
VCM66_RS18715 () 323630..323773 + 144 WP_001900215.1 hypothetical protein -
VCM66_RS19260 () 323867..324046 + 180 Protein_279 DUF645 family protein -
VCM66_RS14780 () 324264..324692 + 429 WP_000620002.1 putative N-acetyltransferase YjaB VF
VCM66_RS14785 () 325280..325762 + 483 WP_000422940.1 GNAT family N-acetyltransferase -
VCM66_RS14795 () 326570..326839 + 270 WP_001114075.1 DUF4160 domain-containing protein Toxin Detail
VCM66_RS14800 () 326833..327354 + 522 WP_000921692.1 DUF2442 domain-containing protein Antitoxin Detail
VCM66_RS18735 () 327411..327524 + 114 WP_001894981.1 hypothetical protein -
VCM66_RS14805 () 327493..328329 + 837 WP_000242986.1 hypothetical protein -
VCM66_RS14810 () 328494..329132 + 639 WP_000230118.1 HD domain-containing protein -
VCM66_RS19275 () 329222..329382 + 161 Protein_287 DUF3709 domain-containing protein -
VCM66_RS18740 () 329403..329624 + 222 WP_012705854.1 DUF3709 domain-containing protein -
VCM66_RS14815 () 329944..330264 + 321 WP_001909340.1 DUF1778 domain-containing protein Antitoxin Detail
VCM66_RS14820 () 330261..330794 + 534 WP_000118351.1 GNAT family N-acetyltransferase Toxin Detail
VCM66_RS14825 () 331032..331310 + 279 WP_000280324.1 DUF3709 domain-containing protein -
VCM66_RS18745 () 331711..331935 + 225 WP_001894423.1 DUF3709 domain-containing protein -
VCM66_RS14835 () 332673..333062 + 390 WP_000491263.1 VOC family protein -
VCM66_RS14840 () 333195..333710 + 516 WP_000090008.1 hypothetical protein -
VCM66_RS14845 () 333851..334288 + 438 WP_001202554.1 NUDIX pyrophosphatase -
VCM66_RS14850 () 334449..334796 + 348 WP_000933409.1 hypothetical protein -
VCM66_RS14855 () 334937..336502 + 1566 WP_000275416.1 RNA-directed DNA polymerase -
VCM66_RS14860 () 336638..337198 + 561 WP_000400489.1 hypothetical protein -
VCM66_RS14865 () 337348..338022 + 675 WP_000073446.1 hypothetical protein -
VCM66_RS14875 () 338292..338501 + 210 WP_032479027.1 DUF645 family protein -
VCM66_RS14880 () 338716..339468 + 753 WP_000116045.1 putative oxidoreductase YgfF VF
VCM66_RS18760 () 339566..339745 + 180 WP_001203705.1 hypothetical protein -
VCM66_RS14885 () 339770..339952 + 183 WP_000923334.1 DUF645 family protein -
VCM66_RS14890 () 340157..340534 + 378 WP_000411106.1 hypothetical protein -
VCM66_RS14895 () 340830..341012 + 183 WP_000923340.1 DUF645 family protein -
VCM66_RS14905 () 341366..341548 + 183 WP_000923153.1 DUF645 family protein -
VCM66_RS14910 () 341743..342420 + 678 WP_000254617.1 HNH endonuclease -
VCM66_RS14915 () 342582..343790 + 1209 WP_000272282.1 deoxyguanosinetriphosphate triphosphohydrolase family protein -
VCM66_RS14920 () 343952..344656 + 705 WP_000087610.1 HNH endonuclease -
VCM66_RS14925 () 344814..345152 + 339 WP_000713853.1 hypothetical protein -
VCM66_RS14930 () 345306..345623 - 318 WP_001180243.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCM66_RS14935 () 345642..345884 - 243 WP_000557292.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
VCM66_RS14940 () 346128..346514 + 387 WP_001015867.1 NUDIX hydrolase -
VCM66_RS18770 () 346571..346684 + 114 WP_001900214.1 hypothetical protein -
VCM66_RS14945 () 346633..346914 + 282 WP_001894429.1 DUF1289 domain-containing protein -
VCM66_RS14955 () 347172..347708 + 537 WP_000469482.1 GNAT family N-acetyltransferase -
VCM66_RS14960 () 347845..348360 + 516 WP_001201509.1 lipocalin family protein -
VCM66_RS14965 () 348510..349007 - 498 WP_000982260.1 GNAT family N-acetyltransferase Toxin Detail
VCM66_RS14970 () 349004..349276 - 273 WP_000246253.1 DUF1778 domain-containing protein Antitoxin Detail
VCM66_RS18790 () 349669..349794 + 126 WP_001900195.1 DUF645 family protein -
VCM66_RS19320 () 349810..349848 + 39 WP_106019118.1 hypothetical protein -
VCM66_RS14980 () 350044..350490 + 447 WP_000006157.1 hypothetical protein -
VCM66_RS14985 () 350638..350907 - 270 WP_000277238.1 type II toxin-antitoxin system YafQ family toxin Toxin Detail
VCM66_RS14990 () 350900..351178 - 279 WP_001258569.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
VCM66_RS14995 () 351428..351685 + 258 WP_000861987.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
VCM66_RS15000 () 351673..351975 + 303 WP_000229318.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCM66_RS18795 () 352264..352488 + 225 WP_001894423.1 DUF3709 domain-containing protein -
VCM66_RS18800 () 352932..353051 + 120 WP_071919600.1 DUF645 family protein -
VCM66_RS19335 () 353055..353108 + 54 Protein_329 DUF645 family protein -
VCM66_RS15010 () 353710..354714 + 1005 WP_000964931.1 LD-carboxypeptidase -
VCM66_RS15020 () 355489..355669 + 181 Protein_331 DUF645 family protein -
VCM66_RS15025 () 355936..356223 + 288 WP_001162670.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCM66_RS15030 () 356234..356551 + 318 WP_001232701.1 HigA family addiction module antidote protein Antitoxin Detail
VCM66_RS19550 () 356548..356658 + 111 WP_134814058.1 DUF3265 domain-containing protein -
VCM66_RS15035 () 356776..357054 + 279 WP_001921601.1 DUF3709 domain-containing protein -
VCM66_RS19350 () 357306..357512 + 207 Protein_336 DUF3709 domain-containing protein -
VCM66_RS18830 () 357712..357813 + 102 WP_001921603.1 hypothetical protein -
VCM66_RS15045 () 357803..358189 + 387 WP_000703163.1 VOC family protein -
VCM66_RS15050 () 358384..358635 + 252 WP_001890111.1 TIGR03643 family protein -
VCM66_RS18835 () 358608..358757 + 150 WP_071908333.1 DUF3265 domain-containing protein -
VCM66_RS15055 () 358809..359162 + 354 WP_000384365.1 hypothetical protein -
VCM66_RS15060 () 359374..359616 + 243 WP_000107461.1 hypothetical protein -
VCM66_RS15065 () 359868..360146 + 279 WP_000280324.1 DUF3709 domain-containing protein -
VCM66_RS19555 () 360521..360664 + 144 Protein_344 DUF645 family protein -
VCM66_RS19560 () 360718..360756 + 39 WP_082798268.1 hypothetical protein -
VCM66_RS15075 () 360968..361435 + 468 WP_001289288.1 OsmC family protein -
VCM66_RS15080 () 361563..362225 + 663 WP_000960654.1 hypothetical protein -
VCM66_RS15085 () 362410..362676 + 267 WP_000589156.1 BrnT family toxin Toxin Detail
VCM66_RS15090 () 362663..362908 + 246 WP_000643598.1 hypothetical protein Antitoxin Detail
VCM66_RS15095 () 363004..363798 + 795 WP_001911581.1 hypothetical protein -
VCM66_RS18865 () 363901..364029 + 129 WP_071908338.1 general secretion pathway protein GspI -
VCM66_RS15100 () 364090..364272 + 183 WP_000923182.1 DUF645 family protein -
VCM66_RS15105 () 364469..364894 + 426 WP_000403005.1 GNAT family N-acetyltransferase -
VCM66_RS15110 () 365034..365624 + 591 WP_000021480.1 hypothetical protein -
VCM66_RS15115 () 365778..366137 + 360 WP_001071529.1 VOC family protein -
VCM66_RS15120 () 366284..366937 + 654 WP_000895163.1 hypothetical protein -
VCM66_RS18870 () 366966..367067 + 102 WP_079993098.1 DUF3265 domain-containing protein -
VCM66_RS18875 () 367083..367598 + 516 Protein_358 lipocalin family protein -
VCM66_RS15130 () 367746..368042 + 297 WP_000617998.1 Dabb family protein -
VCM66_RS15140 () 369181..369630 + 450 WP_001894449.1 hypothetical protein -
VCM66_RS15155 () 371229..372236 + 1008 WP_000093800.1 DUF4365 domain-containing protein -
VCM66_RS19385 () 372233..372343 + 111 Protein_363 DUF3265 domain-containing protein -
VCM66_RS18900 () 372527..372707 + 181 Protein_364 DUF645 family protein -
VCM66_RS15160 () 372974..373261 + 288 WP_001162670.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCM66_RS15165 () 373272..373589 + 318 WP_001232701.1 HigA family addiction module antidote protein Antitoxin Detail
VCM66_RS19565 () 373586..373696 + 111 WP_134814058.1 DUF3265 domain-containing protein -
VCM66_RS15170 () 373724..374200 + 477 WP_001047180.1 GNAT family N-acetyltransferase Toxin Detail
VCM66_RS15175 () 374337..374852 + 516 WP_001201532.1 lipocalin family protein -
VCM66_RS15180 () 374988..375278 - 291 WP_000221352.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCM66_RS15185 () 375268..375516 - 249 WP_000213183.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
VCM66_RS15200 () 376087..376740 + 654 WP_000036957.1 site-specific DNA-methyltransferase -
VCM66_RS15205 () 377012..377437 + 426 WP_000415748.1 hypothetical protein -
VCM66_RS15210 () 377645..378040 + 396 WP_000649527.1 DUF3465 domain-containing protein -
VCM66_RS15215 () 378191..378721 + 531 WP_000415563.1 hypothetical protein -
VCM66_RS15220 () 378859..379359 + 501 WP_000789723.1 hypothetical protein -
VCM66_RS15225 () 379515..379913 + 399 WP_001882293.1 hypothetical protein -
VCM66_RS15230 () 380013..380477 - 465 WP_000140244.1 hypothetical protein -
VCM66_RS15235 () 380860..381846 - 987 WP_001170908.1 Sulfate-binding protein VF
VCM66_RS15240 () 382097..382675 + 579 WP_001020575.1 DJ-1/PfpI family protein -
VCM66_RS18940 () 382979..383149 + 171 WP_001882300.1 DUF645 family protein -
VCM66_RS15245 () 383472..384086 + 615 WP_000789577.1 hypothetical protein -
VCM66_RS15250 () 384233..385090 + 858 WP_001279526.1 DUF2806 domain-containing protein -
VCM66_RS15255 () 385246..385797 + 552 WP_000821930.1 hypothetical protein -
VCM66_RS19570 () 386084..386287 + 204 WP_001911745.1 hypothetical protein -
VCM66_RS19410 () 386568..386741 + 174 WP_001882305.1 DUF3709 domain-containing protein -
VCM66_RS15265 () 387101..387370 + 270 WP_001198131.1 hypothetical protein -
VCM66_RS19610 () 387688..387859 + 172 Protein_388 DUF645 family protein -
VCM66_RS15270 () 388068..388454 + 387 WP_000703163.1 VOC family protein -
VCM66_RS15275 () 388656..388898 + 243 WP_000107461.1 hypothetical protein -
VCM66_RS15280 () 389069..389446 + 378 WP_000411109.1 hypothetical protein -
VCM66_RS19585 () 389503..389617 + 115 Protein_392 acetyltransferase -
VCM66_RS18970 () 389566..389847 + 282 WP_001894453.1 DUF1289 domain-containing protein -
VCM66_RS18985 () 390013..390126 + 114 WP_001889158.1 hypothetical protein -
VCM66_RS18990 () 390075..390302 + 228 WP_001894457.1 DUF1289 domain-containing protein -
VCM66_RS15290 () 390643..390975 + 333 WP_000843587.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCM66_RS15295 () 390962..391276 + 315 WP_000071008.1 DNA-binding transcriptional regulator Antitoxin Detail
VCM66_RS15300 () 391413..391847 + 435 WP_000256036.1 GNAT family N-acetyltransferase -
VCM66_RS19590 () 392015..392170 + 156 WP_000751734.1 hypothetical protein -
VCM66_RS15310 () 392295..393275 - 981 WP_000019370.1 IS5 family transposase ISVch5 Transposase
VCM66_RS15315 () 393343..393615 + 273 Protein_401 Streptogramin A acetyltransferase VF
VCM66_RS15320 () 393786..394478 + 693 WP_001047169.1 GNAT family N-acetyltransferase Antitoxin Detail
VCM66_RS15325 () 394478..394879 + 402 WP_000351248.1 type II toxin-antitoxin system death-on-curing family toxin Toxin Detail
VCM66_RS19425 () 394849..394992 + 144 WP_071908341.1 DUF3265 domain-containing protein -
VCM66_RS15330 () 395067..395480 + 414 WP_000049417.1 VOC family protein -
VCM66_RS15335 () 395694..395945 + 252 WP_001250179.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
VCM66_RS15340 () 395935..396222 + 288 WP_000221354.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCM66_RS15345 () 396350..396805 + 456 WP_001245327.1 GNAT family N-acetyltransferase -
VCM66_RS19005 () 397127..397279 + 153 WP_001884520.1 DUF645 family protein -
VCM66_RS15350 () 397481..397978 - 498 WP_000982260.1 GNAT family N-acetyltransferase Toxin Detail
VCM66_RS15355 () 397975..398247 - 273 WP_000246253.1 DUF1778 domain-containing protein Antitoxin Detail
VCM66_RS15360 () 398478..399146 + 669 WP_000043871.1 hypothetical protein -
VCM66_RS15365 () 399298..399585 + 288 WP_000426470.1 hypothetical protein -
VCM66_RS15370 () 399726..400097 + 372 WP_001164080.1 nucleotide pyrophosphohydrolase -
VCM66_RS19595 () 400164..400589 + 426 WP_001882332.1 DUF1778 domain-containing protein Antitoxin Detail
VCM66_RS15380 () 400586..401119 + 534 WP_000118351.1 GNAT family N-acetyltransferase Toxin Detail
VCM66_RS15385 () 401321..401578 + 258 WP_000861987.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin Detail
VCM66_RS15390 () 401566..401868 + 303 WP_000229317.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin Detail
VCM66_RS15395 () 402022..402231 + 210 Protein_419 GNAT family N-acetyltransferase -
VCM66_RS15400 () 402350..402787 + 438 WP_000503169.1 IS200-IS605 family transposase IS1004 Transposase
VCM66_RS15405 () 402851..403069 + 219 WP_071908318.1 GNAT family N-acetyltransferase -
VCM66_RS15410 () 403244..404116 + 873 WP_000254716.1 DUF3800 domain-containing protein -
VCM66_RS15415 () 404266..404865 + 600 WP_001891245.1 glutathione S-transferase N-terminal domain-containing protein -
VCM66_RS19440 () 404922..405026 + 105 WP_099607150.1 acetyltransferase Antitoxin Detail
VCM66_RS15420 () 405057..405326 + 270 WP_001114075.1 DUF4160 domain-containing protein Toxin Detail
VCM66_RS15425 () 405320..405841 + 522 WP_000921691.1 DUF2442 domain-containing protein Antitoxin Detail
VCM66_RS19445 () 406140..406265 + 126 WP_001905700.1 DUF645 family protein -
VCM66_RS15430 () 406516..406911 + 396 WP_001000867.1 hypothetical protein -
VCM66_RS15435 () 407050..407328 - 279 WP_000578476.1 type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family Toxin Detail
VCM66_RS15440 () 407325..407609 - 285 WP_000381183.1 type II toxin-antitoxin system RelB/DinJ family antitoxin Antitoxin Detail
VCM66_RS15445 () 407803..408318 + 516 WP_000343779.1 dTDP-fucosamine acetyltransferase VF
VCM66_RS15450 () 408502..408915 + 414 WP_000049420.1 VOC family protein -
VCM66_RS15460 () 409470..410647 + 1178 WP_086010879.1 IS3-like element ISVch4 family transposase -
VCM66_RS15465 () 411066..413843 + 2778 WP_000509635.1 alkaline phosphatase family protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance