Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | QN282_RS00130 | Genome accession | NZ_CP134689 |
| Coordinates | 10676..11155 (+) | Length | 159 a.a. |
| NCBI ID | WP_001204194.1 | Uniprot ID | A0AAV3JNR5 |
| Organism | Streptococcus agalactiae strain HU05/19 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 11334..60137 | 10676..11155 | flank | 179 |
| IScluster/Tn | 9195..10000 | 10676..11155 | flank | 676 |
Gene organization within MGE regions
Location: 9195..60137
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN282_RS00125 (QN282_00125) | - | 10057..10476 (+) | 420 | WP_000784700.1 | YjdF family protein | - |
| QN282_RS00130 (QN282_00130) | comX/sigX | 10676..11155 (+) | 480 | WP_001204194.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| QN282_RS00135 (QN282_00135) | - | 11334..12431 (-) | 1098 | WP_000570847.1 | site-specific integrase | - |
| QN282_RS00140 (QN282_00140) | - | 12612..13238 (-) | 627 | WP_000438040.1 | TrbC/VirB2 family protein | - |
| QN282_RS00145 (QN282_00145) | - | 13290..13670 (-) | 381 | WP_041981104.1 | ImmA/IrrE family metallo-endopeptidase | - |
| QN282_RS00150 (QN282_00150) | - | 13660..14019 (-) | 360 | WP_000207087.1 | helix-turn-helix domain-containing protein | - |
| QN282_RS00155 (QN282_00155) | - | 14398..14541 (+) | 144 | WP_001113676.1 | hypothetical protein | - |
| QN282_RS00160 (QN282_00160) | - | 14661..14843 (-) | 183 | WP_000274022.1 | YegP family protein | - |
| QN282_RS00165 (QN282_00165) | - | 14901..15059 (+) | 159 | WP_001104146.1 | hypothetical protein | - |
| QN282_RS00170 (QN282_00170) | - | 15206..15901 (-) | 696 | WP_000039331.1 | hypothetical protein | - |
| QN282_RS00175 (QN282_00175) | - | 15956..16165 (+) | 210 | WP_001247539.1 | hypothetical protein | - |
| QN282_RS00180 (QN282_00180) | - | 16154..16540 (-) | 387 | WP_000460827.1 | hypothetical protein | - |
| QN282_RS00185 (QN282_00185) | - | 16780..17115 (-) | 336 | WP_000360289.1 | hypothetical protein | - |
| QN282_RS00190 (QN282_00190) | - | 17191..17391 (+) | 201 | WP_001875236.1 | helix-turn-helix transcriptional regulator | - |
| QN282_RS00195 (QN282_00195) | - | 17439..18167 (+) | 729 | Protein_19 | phage antirepressor KilAC domain-containing protein | - |
| QN282_RS00200 (QN282_00200) | - | 18220..18357 (+) | 138 | WP_000627309.1 | hypothetical protein | - |
| QN282_RS00205 (QN282_00205) | - | 18484..18630 (+) | 147 | WP_001867241.1 | hypothetical protein | - |
| QN282_RS00210 (QN282_00210) | - | 18593..18901 (-) | 309 | WP_001000651.1 | hypothetical protein | - |
| QN282_RS00215 (QN282_00215) | - | 19011..19268 (+) | 258 | WP_016480517.1 | hypothetical protein | - |
| QN282_RS00220 (QN282_00220) | - | 19297..19521 (+) | 225 | WP_000431164.1 | hypothetical protein | - |
| QN282_RS00225 (QN282_00225) | - | 19555..20088 (+) | 534 | WP_264402120.1 | hypothetical protein | - |
| QN282_RS00230 (QN282_00230) | - | 20172..20525 (+) | 354 | WP_264402119.1 | helix-turn-helix domain-containing protein | - |
| QN282_RS00235 (QN282_00235) | - | 20608..20922 (+) | 315 | WP_000135595.1 | hypothetical protein | - |
| QN282_RS00240 (QN282_00240) | - | 20909..21601 (+) | 693 | WP_000704953.1 | AAA family ATPase | - |
| QN282_RS00245 (QN282_00245) | - | 21588..22931 (+) | 1344 | WP_000776547.1 | DEAD/DEAH box helicase | - |
| QN282_RS00250 (QN282_00250) | - | 22947..23408 (+) | 462 | WP_000494143.1 | DUF669 domain-containing protein | - |
| QN282_RS00255 (QN282_00255) | - | 23412..24215 (+) | 804 | WP_000250451.1 | bifunctional DNA primase/polymerase | - |
| QN282_RS00260 (QN282_00260) | - | 24208..25725 (+) | 1518 | WP_000564707.1 | DNA primase family protein | - |
| QN282_RS00265 (QN282_00265) | - | 25969..26295 (+) | 327 | WP_000206193.1 | VRR-NUC domain-containing protein | - |
| QN282_RS00270 (QN282_00270) | - | 26276..26621 (+) | 346 | Protein_34 | hypothetical protein | - |
| QN282_RS00275 (QN282_00275) | - | 26633..26920 (+) | 288 | WP_000130094.1 | nucleotide modification associated domain-containing protein | - |
| QN282_RS00280 (QN282_00280) | - | 26904..27311 (+) | 408 | WP_000612386.1 | YopX family protein | - |
| QN282_RS00285 (QN282_00285) | - | 27435..27578 (+) | 144 | WP_000564611.1 | hypothetical protein | - |
| QN282_RS00290 (QN282_00290) | - | 27575..28075 (+) | 501 | WP_060458033.1 | DUF1642 domain-containing protein | - |
| QN282_RS00295 (QN282_00295) | - | 28096..28395 (+) | 300 | WP_001105090.1 | hypothetical protein | - |
| QN282_RS00300 (QN282_00300) | - | 28583..28777 (+) | 195 | WP_000221698.1 | hypothetical protein | - |
| QN282_RS00305 (QN282_00305) | - | 28774..29040 (+) | 267 | WP_000660738.1 | hypothetical protein | - |
| QN282_RS00310 (QN282_00310) | - | 29430..29864 (+) | 435 | WP_000142570.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| QN282_RS00315 (QN282_00315) | - | 30587..31084 (+) | 498 | WP_079261306.1 | terminase small subunit | - |
| QN282_RS00320 (QN282_00320) | - | 31071..32312 (+) | 1242 | WP_000423579.1 | PBSX family phage terminase large subunit | - |
| QN282_RS00325 (QN282_00325) | - | 32325..33818 (+) | 1494 | WP_000930110.1 | phage portal protein | - |
| QN282_RS00330 (QN282_00330) | - | 33802..34773 (+) | 972 | WP_000367179.1 | minor capsid protein | - |
| QN282_RS00335 (QN282_00335) | - | 34770..34973 (+) | 204 | WP_001042289.1 | hypothetical protein | - |
| QN282_RS00340 (QN282_00340) | - | 35084..35662 (+) | 579 | WP_000774603.1 | DUF4355 domain-containing protein | - |
| QN282_RS00345 (QN282_00345) | - | 35672..36055 (+) | 384 | WP_001042769.1 | head decoration protein | - |
| QN282_RS00350 (QN282_00350) | - | 36055..37107 (+) | 1053 | WP_001185214.1 | major capsid protein | - |
| QN282_RS00355 (QN282_00355) | - | 37120..37374 (+) | 255 | WP_001229661.1 | HeH/LEM domain-containing protein | - |
| QN282_RS00360 (QN282_00360) | - | 37390..37743 (+) | 354 | WP_000411527.1 | phage head-tail connector protein | - |
| QN282_RS00365 (QN282_00365) | - | 37740..38039 (+) | 300 | WP_001270064.1 | hypothetical protein | - |
| QN282_RS00370 (QN282_00370) | - | 38032..38412 (+) | 381 | WP_000609259.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| QN282_RS00375 (QN282_00375) | - | 38409..38798 (+) | 390 | WP_000977637.1 | DUF3168 domain-containing protein | - |
| QN282_RS00380 (QN282_00380) | - | 38807..39334 (+) | 528 | WP_000258802.1 | phage major tail protein, TP901-1 family | - |
| QN282_RS00385 (QN282_00385) | - | 39409..39762 (+) | 354 | WP_000659174.1 | tail assembly chaperone | - |
| QN282_RS00390 (QN282_00390) | - | 39882..40157 (+) | 276 | WP_000218309.1 | hypothetical protein | - |
| QN282_RS00395 (QN282_00395) | - | 40150..42798 (+) | 2649 | WP_000071276.1 | phage tail tape measure protein | - |
| QN282_RS00400 (QN282_00400) | - | 42799..44361 (+) | 1563 | WP_049447604.1 | distal tail protein Dit | - |
| QN282_RS00405 (QN282_00405) | - | 44352..48479 (+) | 4128 | WP_410531116.1 | glucosaminidase domain-containing protein | - |
| QN282_RS00410 (QN282_00410) | - | 48492..50483 (+) | 1992 | WP_410531117.1 | DUF859 family phage minor structural protein | - |
| QN282_RS00415 (QN282_00415) | - | 50497..50823 (+) | 327 | WP_000404431.1 | DUF1366 domain-containing protein | - |
| QN282_RS00420 (QN282_00420) | - | 50798..51010 (+) | 213 | WP_000698337.1 | hypothetical protein | - |
| QN282_RS00425 (QN282_00425) | - | 51023..51325 (+) | 303 | WP_000215499.1 | hypothetical protein | - |
| QN282_RS00430 (QN282_00430) | - | 51327..51581 (+) | 255 | WP_000611524.1 | phage holin | - |
| QN282_RS00435 (QN282_00435) | - | 51707..53041 (+) | 1335 | WP_410531118.1 | GH25 family lysozyme | - |
| QN282_RS00440 (QN282_00440) | - | 53171..54067 (+) | 897 | WP_001061853.1 | sensor histidine kinase | - |
| QN282_RS00445 (QN282_00445) | - | 54061..54360 (+) | 300 | WP_000258211.1 | STAS-like domain-containing protein | - |
| QN282_RS00450 (QN282_00450) | - | 54470..54670 (+) | 201 | WP_000076712.1 | CsbD family protein | - |
| QN282_RS00455 (QN282_00455) | - | 54751..55002 (-) | 252 | WP_050196899.1 | hypothetical protein | - |
| QN282_RS00460 (QN282_00460) | - | 55142..55288 (-) | 147 | WP_001030870.1 | hypothetical protein | - |
| QN282_RS00465 (QN282_00465) | - | 55439..55648 (+) | 210 | WP_000424774.1 | helix-turn-helix domain-containing protein | - |
| QN282_RS00470 (QN282_00470) | - | 55731..56555 (+) | 825 | WP_001125980.1 | DUF3825 domain-containing protein | - |
| QN282_RS00475 (QN282_00475) | - | 56922..57467 (+) | 546 | WP_001870774.1 | exotoxin beta-grasp domain-containing protein | - |
| QN282_RS00480 (QN282_00480) | prx | 57729..57911 (+) | 183 | WP_000965649.1 | hypothetical protein | Regulator |
| QN282_RS00485 (QN282_00485) | - | 58124..58816 (+) | 693 | WP_000049272.1 | histidine phosphatase family protein | - |
| QN282_RS00490 (QN282_00490) | - | 58813..59565 (+) | 753 | WP_000739660.1 | M15 family metallopeptidase | - |
| QN282_RS00495 (QN282_00495) | - | 59562..60137 (+) | 576 | WP_001231504.1 | glycoside hydrolase family 73 protein | - |
Sequence
Protein
Download Length: 159 a.a. Molecular weight: 19447.28 Da Isoelectric Point: 6.2639
>NTDB_id=882784 QN282_RS00130 WP_001204194.1 10676..11155(+) (comX/sigX) [Streptococcus agalactiae strain HU05/19]
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQK
RQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLISGERFAGKKQFIRDIQPFFNAFKAD
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQK
RQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLISGERFAGKKQFIRDIQPFFNAFKAD
Nucleotide
Download Length: 480 bp
>NTDB_id=882784 QN282_RS00130 WP_001204194.1 10676..11155(+) (comX/sigX) [Streptococcus agalactiae strain HU05/19]
TTGAGAGATTTTGAGGAGTTGTTTGATAAAGTAAAGCCAATCGTAATGAAGCTGAGAAGAAATTATTTTGTTCAACTTTG
GGAATATGATGATTGGATTCAAGAAGGACGTATTGTACTTTTTAGGTTGCTTGAAGAGCATCCGTATTTATTGGATAATG
AAAGCAAACTATTCATTTACTTTAAAACAAAATTTTCAAATTATTTAAACGATGTATTAAGACACCAAGATTGTCAAAAG
CGACAATTTAATAAAATGCCTTATGAAGAAATAAGTGAAGTTAGTCACTATGTTAAGAGTAAAGGACTAGTTTTAGATGA
CTATATTGCTTATCGTGATACTTTAACAAAAGTGGAAGAAACTTTGTCAGATATTGATAAAGAAAAATTTGAAAAACTGA
TTAGTGGTGAACGTTTTGCGGGGAAGAAACAATTCATACGAGATATTCAACCCTTTTTCAATGCTTTTAAAGCGGATTAA
TTGAGAGATTTTGAGGAGTTGTTTGATAAAGTAAAGCCAATCGTAATGAAGCTGAGAAGAAATTATTTTGTTCAACTTTG
GGAATATGATGATTGGATTCAAGAAGGACGTATTGTACTTTTTAGGTTGCTTGAAGAGCATCCGTATTTATTGGATAATG
AAAGCAAACTATTCATTTACTTTAAAACAAAATTTTCAAATTATTTAAACGATGTATTAAGACACCAAGATTGTCAAAAG
CGACAATTTAATAAAATGCCTTATGAAGAAATAAGTGAAGTTAGTCACTATGTTAAGAGTAAAGGACTAGTTTTAGATGA
CTATATTGCTTATCGTGATACTTTAACAAAAGTGGAAGAAACTTTGTCAGATATTGATAAAGAAAAATTTGAAAAACTGA
TTAGTGGTGAACGTTTTGCGGGGAAGAAACAATTCATACGAGATATTCAACCCTTTTTCAATGCTTTTAAAGCGGATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.