Detailed information    

insolico Bioinformatically predicted

Overview


Name   prx   Type   Regulator
Locus tag   QN282_RS00480 Genome accession   NZ_CP134689
Coordinates   57729..57911 (+) Length   60 a.a.
NCBI ID   WP_000965649.1    Uniprot ID   A0AAV3JNR0
Organism   Streptococcus agalactiae strain HU05/19     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context


Location: 52729..62911
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QN282_RS00440 (QN282_00440) - 53171..54067 (+) 897 WP_001061853.1 sensor histidine kinase -
  QN282_RS00445 (QN282_00445) - 54061..54360 (+) 300 WP_000258211.1 STAS-like domain-containing protein -
  QN282_RS00450 (QN282_00450) - 54470..54670 (+) 201 WP_000076712.1 CsbD family protein -
  QN282_RS00455 (QN282_00455) - 54751..55002 (-) 252 WP_050196899.1 hypothetical protein -
  QN282_RS00460 (QN282_00460) - 55142..55288 (-) 147 WP_001030870.1 hypothetical protein -
  QN282_RS00465 (QN282_00465) - 55439..55648 (+) 210 WP_000424774.1 helix-turn-helix domain-containing protein -
  QN282_RS00470 (QN282_00470) - 55731..56555 (+) 825 WP_001125980.1 DUF3825 domain-containing protein -
  QN282_RS00475 (QN282_00475) - 56922..57467 (+) 546 WP_001870774.1 exotoxin beta-grasp domain-containing protein -
  QN282_RS00480 (QN282_00480) prx 57729..57911 (+) 183 WP_000965649.1 hypothetical protein Regulator
  QN282_RS00485 (QN282_00485) - 58124..58816 (+) 693 WP_000049272.1 histidine phosphatase family protein -
  QN282_RS00490 (QN282_00490) - 58813..59565 (+) 753 WP_000739660.1 M15 family metallopeptidase -
  QN282_RS00495 (QN282_00495) - 59562..60137 (+) 576 WP_001231504.1 glycoside hydrolase family 73 protein -
  QN282_RS00500 (QN282_00500) hrcA 60280..61314 (+) 1035 WP_001872861.1 heat-inducible transcriptional repressor HrcA -
  QN282_RS00505 (QN282_00505) grpE 61317..61889 (+) 573 WP_001865751.1 nucleotide exchange factor GrpE -

Sequence


Protein


Download         Length: 60 a.a.        Molecular weight: 7024.13 Da        Isoelectric Point: 4.1954

>NTDB_id=882785 QN282_RS00480 WP_000965649.1 57729..57911(+) (prx) [Streptococcus agalactiae strain HU05/19]
MLYIDEFKEAIEKGYISSDTVMVVRKNGKIFDYVLPGEPVRLWEVATEEKVEEVLMELDK

Nucleotide


Download         Length: 183 bp        

>NTDB_id=882785 QN282_RS00480 WP_000965649.1 57729..57911(+) (prx) [Streptococcus agalactiae strain HU05/19]
ATGTTATATATAGATGAGTTTAAAGAAGCGATTGAAAAAGGATATATCAGCAGTGATACAGTGATGGTTGTGCGTAAGAA
CGGAAAGATATTTGATTATGTGTTACCTGGTGAGCCTGTAAGATTGTGGGAAGTTGCGACAGAGGAAAAAGTGGAAGAAG
TGTTGATGGAATTAGATAAATAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS315

68.333

100

0.683

  prx Streptococcus pyogenes MGAS315

65

100

0.65

  prx Streptococcus pyogenes MGAS315

65

100

0.65

  prx Streptococcus pyogenes MGAS8232

65

100

0.65

  prx Streptococcus pyogenes MGAS315

82.927

68.333

0.567

  prx Streptococcus pyogenes MGAS315

73.171

68.333

0.5

  prx Streptococcus pyogenes MGAS315

70.732

68.333

0.483