Detailed information NTG0042633

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: RJP_RS09965
• Genome accession: NC_016050
• Coordinates: 453392..453835 (-)
• Length: 147 a.a.
• NCBI ID: WP_197535034.1
• Uniprot ID: -
• Organism: Rickettsia japonica YH
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 448392..458835

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RJP_RS11275	-	448704..448898 (+)	195	Protein_483	hypothetical protein	-
RJP_RS02410 (RJP_0349)	gltX	449255..450598 (-)	1344	WP_014120685.1	glutamate--tRNA ligase	-
RJP_RS02415 (RJP_0350)	topA	450707..453037 (-)	2331	WP_014120686.1	type I DNA topoisomerase	-
RJP_RS09960	-	453038..453166 (-)	129	WP_197535033.1	hypothetical protein	-
RJP_RS10990	-	453233..453355 (-)	123	WP_269076343.1	hypothetical protein	-
RJP_RS09965	dprA	453392..453835 (-)	444	WP_197535034.1	DNA-processing protein DprA	Machinery gene
RJP_RS11280	-	453966..454112 (-)	147	WP_332844263.1	hypothetical protein	-
RJP_RS02425 (RJP_0351)	-	454440..455042 (-)	603	WP_024704503.1	peroxiredoxin	-
RJP_RS02430 (RJP_0352)	-	455124..456059 (-)	936	WP_014014149.1	SPFH domain-containing protein	-
RJP_RS02435 (RJP_0353)	-	456132..456362 (-)	231	WP_014120688.1	hypothetical protein	-
RJP_RS02440 (RJP_0354)	-	456429..457997 (-)	1569	WP_014120689.1	phosphoethanolamine transferase	-
RJP_RS02445 (RJP_0355)	ruvX	458033..458497 (+)	465	WP_014120690.1	Holliday junction resolvase RuvX	-

Sequence

Protein

• Length: 147 a.a.
• Molecular weight: 15926.37 Da
• Isoelectric Point: 8.5309

>NTDB_id=42633 RJP_RS09965 WP_197535034.1 453392..453835(-) (dprA) [Rickettsia japonica YH]
MRCNSRHKNAAANGRSFAHKIANDLVKEGYITVSGLARGIDSSVHQAAISQTIEVIVGGIDHIYPPENKKLFENLAEEGL
ILAELPIGFTPLGKHFPQRNRIISGLALGVVVVEASLKSNSLITAKFALEQNREIFAVPGFPLDPRC

Nucleotide

• Length: 444 bp

>NTDB_id=42633 RJP_RS09965 WP_197535034.1 453392..453835(-) (dprA) [Rickettsia japonica YH]
ATGCGTTGCAATAGTAGGCACAAAAACGCTGCTGCAAACGGAAGAAGCTTTGCGCATAAAATTGCAAATGATTTAGTAAA
AGAAGGTTATATAACCGTTTCAGGGTTAGCACGAGGAATAGATAGCAGCGTACATCAAGCTGCAATTTCTCAAACTATCG
AAGTTATTGTAGGCGGTATTGATCATATATATCCACCGGAAAATAAAAAACTATTTGAAAATTTAGCAGAAGAAGGTTTA
ATATTAGCTGAGTTACCTATCGGCTTTACCCCGCTTGGAAAACATTTCCCACAGCGTAACAGGATAATATCGGGACTAGC
CTTAGGAGTAGTGGTAGTAGAAGCAAGCTTAAAATCCAATTCATTAATAACTGCAAAATTTGCACTTGAACAAAATAGGG
AAATATTTGCCGTTCCTGGCTTTCCTTTAGATCCAAGATGTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (9-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Neisseria gonorrhoeae MS11	46.753	100	0.49
dprA	Neisseria gonorrhoeae strain FA1090	46.104	100	0.483
dprA	Bacillus subtilis subsp. subtilis str. 168	48.227	95.918	0.463
dprA	Acinetobacter baumannii strain A118	50	92.517	0.463
dprA	Acinetobacter baumannii D1279779	50	92.517	0.463
dprA	Lactococcus lactis subsp. cremoris KW2	50.746	91.156	0.463
dprA	Neisseria meningitidis MC58	47.482	94.558	0.449
dprA	Neisseria meningitidis strain C311	47.482	94.558	0.449
dprA	Legionella pneumophila strain ERS1305867	47.059	92.517	0.435
dprA	Streptococcus mutans UA159	45.714	95.238	0.435
dprA	Vibrio cholerae strain A1552	46.324	92.517	0.429
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	42.568	100	0.429
dprA	Thermus thermophilus HB27	44.056	97.279	0.429
dprA/cilB/dalA	Streptococcus mitis SK321	44.286	95.238	0.422
dprA	Vibrio campbellii strain DS40M4	45.926	91.837	0.422
dprA	Haemophilus influenzae Rd KW20	47.328	89.116	0.422
dprA	Glaesserella parasuis strain SC1401	42.958	96.599	0.415
dprA	Acinetobacter baylyi ADP1	44.853	92.517	0.415
dprA	Staphylococcus aureus MW2	41.549	96.599	0.401
dprA	Staphylococcus aureus N315	41.549	96.599	0.401
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	48.718	79.592	0.388
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	48.718	79.592	0.388
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	48.718	79.592	0.388
dprA/cilB/dalA	Streptococcus pneumoniae D39	48.718	79.592	0.388
dprA/cilB/dalA	Streptococcus pneumoniae R6	48.718	79.592	0.388