Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FNL90_RS02405 Genome accession   NZ_CP041408
Coordinates   453860..454669 (+) Length   269 a.a.
NCBI ID   WP_023612763.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain 37-97S     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 448860..459669
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FNL90_RS02385 (FNL90_02480) - 449302..450549 (+) 1248 WP_047235203.1 AMP-binding protein -
  FNL90_RS02390 (FNL90_02485) - 450605..451639 (+) 1035 WP_174147118.1 DUF3114 domain-containing protein -
  FNL90_RS02395 (FNL90_02490) yycF 451801..452511 (+) 711 WP_002985645.1 response regulator YycF -
  FNL90_RS02400 (FNL90_02495) vicK 452504..453856 (+) 1353 WP_014407395.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FNL90_RS02405 (FNL90_02500) vicX 453860..454669 (+) 810 WP_023612763.1 MBL fold metallo-hydrolase Regulator
  FNL90_RS02410 (FNL90_02505) rnc 455088..455780 (+) 693 WP_002990670.1 ribonuclease III -
  FNL90_RS02415 (FNL90_02510) smc 455781..459320 (+) 3540 WP_047235204.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30081.18 Da        Isoelectric Point: 5.5314

>NTDB_id=325860 FNL90_RS02405 WP_023612763.1 453860..454669(+) (vicX) [Streptococcus pyogenes strain 37-97S]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=325860 FNL90_RS02405 WP_023612763.1 453860..454669(+) (vicX) [Streptococcus pyogenes strain 37-97S]
ATGAATGAGAGTGGTTTTAAATACAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
GTCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGGTTCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment