Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | C0058_RS30570 | Genome accession | NZ_CP025624 |
| Coordinates | 6481708..6482742 (-) | Length | 344 a.a. |
| NCBI ID | WP_008434153.1 | Uniprot ID | A0A2N7YCP4 |
| Organism | Pseudomonas sp. NC02 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6476708..6487742
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0058_RS30540 (C0058_30545) | ruvX | 6476830..6477267 (+) | 438 | WP_003213744.1 | Holliday junction resolvase RuvX | - |
| C0058_RS30545 (C0058_30550) | pyrR | 6477340..6477846 (+) | 507 | WP_003213746.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| C0058_RS30550 (C0058_30555) | - | 6477871..6478875 (+) | 1005 | WP_003213748.1 | aspartate carbamoyltransferase catalytic subunit | - |
| C0058_RS30555 (C0058_30560) | - | 6478872..6480143 (+) | 1272 | WP_003213750.1 | dihydroorotase | - |
| C0058_RS30560 (C0058_30565) | - | 6480278..6480706 (-) | 429 | WP_003213752.1 | TM2 domain-containing protein | - |
| C0058_RS30565 (C0058_30570) | - | 6480957..6481592 (+) | 636 | WP_023659314.1 | C40 family peptidase | - |
| C0058_RS30570 (C0058_30575) | pilT | 6481708..6482742 (-) | 1035 | WP_008434153.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| C0058_RS30575 (C0058_30580) | - | 6482800..6483486 (+) | 687 | WP_008434154.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| C0058_RS30580 (C0058_30585) | proC | 6483520..6484338 (+) | 819 | WP_008434156.1 | pyrroline-5-carboxylate reductase | - |
| C0058_RS30585 (C0058_30590) | - | 6484363..6484950 (+) | 588 | WP_003213764.1 | YggT family protein | - |
| C0058_RS30590 (C0058_30595) | - | 6485181..6486320 (+) | 1140 | WP_008434158.1 | homoserine O-acetyltransferase | - |
| C0058_RS30595 (C0058_30600) | metW | 6486328..6486948 (+) | 621 | WP_102370096.1 | methionine biosynthesis protein MetW | - |
| C0058_RS30600 (C0058_30605) | - | 6486970..6487404 (+) | 435 | WP_003213770.1 | DUF4426 domain-containing protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37633.43 Da Isoelectric Point: 7.1685
>NTDB_id=263149 C0058_RS30570 WP_008434153.1 6481708..6482742(-) (pilT) [Pseudomonas sp. NC02]
MDITELLAAGVRLRASDLHLSAGLAPMLRVDGEVWPLDWPVLAPVQVAALLSPLLNNHQQKDFETSLETDFAFELPEVAR
FRVNVFQQHRGMGAVFRTIPSTVQSLEHLGLGEVFRRIADLPRGLVLVTGPTGSGKSTTLAAMIDYLNTHRRQHILTLED
PIEFIHQPKNALINQRQVHRDTHSFSAALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTVDRV
VDVFPAGEKTMVRSMLSESLQAVVSQVLVKKVGGGRVAAHEIMLGTPAIRNLIREDKVAQMYSAIQTGGALGMTTLDMSL
KALVSQGLISREHAREKARVPGDI
MDITELLAAGVRLRASDLHLSAGLAPMLRVDGEVWPLDWPVLAPVQVAALLSPLLNNHQQKDFETSLETDFAFELPEVAR
FRVNVFQQHRGMGAVFRTIPSTVQSLEHLGLGEVFRRIADLPRGLVLVTGPTGSGKSTTLAAMIDYLNTHRRQHILTLED
PIEFIHQPKNALINQRQVHRDTHSFSAALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTVDRV
VDVFPAGEKTMVRSMLSESLQAVVSQVLVKKVGGGRVAAHEIMLGTPAIRNLIREDKVAQMYSAIQTGGALGMTTLDMSL
KALVSQGLISREHAREKARVPGDI
Nucleotide
Download Length: 1035 bp
>NTDB_id=263149 C0058_RS30570 WP_008434153.1 6481708..6482742(-) (pilT) [Pseudomonas sp. NC02]
ATGGATATCACTGAACTGCTGGCCGCCGGCGTACGCCTGCGGGCCTCGGACCTGCATCTGTCGGCCGGGTTGGCGCCGAT
GCTGCGAGTGGATGGCGAGGTCTGGCCACTCGATTGGCCTGTACTTGCGCCGGTGCAAGTGGCGGCGTTGCTCAGCCCTT
TGCTGAACAATCACCAGCAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAGTTGCCCGAGGTGGCGCGG
TTTCGGGTGAATGTGTTCCAGCAGCACCGGGGCATGGGCGCGGTGTTTCGTACCATCCCCTCAACGGTGCAGAGCCTGGA
ACACCTGGGGTTGGGCGAGGTGTTCCGGCGCATCGCAGACCTGCCACGGGGGCTGGTGCTGGTCACCGGGCCGACCGGTT
CCGGCAAGTCCACCACCCTGGCAGCGATGATCGACTACCTCAACACCCATCGTCGCCAGCACATCCTCACCCTTGAAGAC
CCGATCGAGTTTATCCACCAACCGAAAAATGCCCTGATCAACCAGCGACAGGTGCATCGCGATACCCACAGTTTCTCGGC
GGCCCTGCGTTCGGCATTGCGGGAGGACCCGGATGTGATCCTGGTTGGCGAATTGCGAGACCTGGAAACCATTCGGCTCG
CGCTGACGGCGGCGGAAACCGGGCACCTGGTGTTTGGCACGTTGCACACCACGTCGGCGGCTAAAACCGTGGACCGGGTG
GTGGATGTGTTTCCGGCGGGGGAAAAGACCATGGTCCGCTCGATGCTCTCGGAGTCATTGCAGGCGGTGGTGTCCCAGGT
GCTGGTGAAGAAGGTCGGCGGCGGGCGGGTGGCGGCTCACGAAATCATGCTCGGCACACCGGCGATTCGTAATTTGATCC
GCGAGGACAAGGTGGCGCAGATGTATTCGGCGATCCAGACGGGTGGGGCGCTGGGGATGACGACGCTGGACATGAGTTTG
AAGGCGTTGGTCAGCCAGGGGCTGATCAGCCGGGAACATGCCCGGGAGAAGGCGAGGGTGCCTGGGGATATTTAA
ATGGATATCACTGAACTGCTGGCCGCCGGCGTACGCCTGCGGGCCTCGGACCTGCATCTGTCGGCCGGGTTGGCGCCGAT
GCTGCGAGTGGATGGCGAGGTCTGGCCACTCGATTGGCCTGTACTTGCGCCGGTGCAAGTGGCGGCGTTGCTCAGCCCTT
TGCTGAACAATCACCAGCAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAGTTGCCCGAGGTGGCGCGG
TTTCGGGTGAATGTGTTCCAGCAGCACCGGGGCATGGGCGCGGTGTTTCGTACCATCCCCTCAACGGTGCAGAGCCTGGA
ACACCTGGGGTTGGGCGAGGTGTTCCGGCGCATCGCAGACCTGCCACGGGGGCTGGTGCTGGTCACCGGGCCGACCGGTT
CCGGCAAGTCCACCACCCTGGCAGCGATGATCGACTACCTCAACACCCATCGTCGCCAGCACATCCTCACCCTTGAAGAC
CCGATCGAGTTTATCCACCAACCGAAAAATGCCCTGATCAACCAGCGACAGGTGCATCGCGATACCCACAGTTTCTCGGC
GGCCCTGCGTTCGGCATTGCGGGAGGACCCGGATGTGATCCTGGTTGGCGAATTGCGAGACCTGGAAACCATTCGGCTCG
CGCTGACGGCGGCGGAAACCGGGCACCTGGTGTTTGGCACGTTGCACACCACGTCGGCGGCTAAAACCGTGGACCGGGTG
GTGGATGTGTTTCCGGCGGGGGAAAAGACCATGGTCCGCTCGATGCTCTCGGAGTCATTGCAGGCGGTGGTGTCCCAGGT
GCTGGTGAAGAAGGTCGGCGGCGGGCGGGTGGCGGCTCACGAAATCATGCTCGGCACACCGGCGATTCGTAATTTGATCC
GCGAGGACAAGGTGGCGCAGATGTATTCGGCGATCCAGACGGGTGGGGCGCTGGGGATGACGACGCTGGACATGAGTTTG
AAGGCGTTGGTCAGCCAGGGGCTGATCAGCCGGGAACATGCCCGGGAGAAGGCGAGGGTGCCTGGGGATATTTAA
Similar proteins
Only experimentally validated proteins are listed.