Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | A7317_RS27445 | Genome accession | NZ_CP015637 |
| Coordinates | 6134432..6135466 (+) | Length | 344 a.a. |
| NCBI ID | WP_069077198.1 | Uniprot ID | A0A1B3DGH4 |
| Organism | Pseudomonas fluorescens strain L321 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6129432..6140466
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A7317_RS27415 (A7317_27385) | - | 6129875..6130309 (-) | 435 | WP_024077911.1 | DUF4426 domain-containing protein | - |
| A7317_RS27420 (A7317_27390) | metW | 6130331..6130951 (-) | 621 | WP_024077910.1 | methionine biosynthesis protein MetW | - |
| A7317_RS27425 (A7317_27395) | metX | 6130959..6132098 (-) | 1140 | WP_024077909.1 | homoserine O-succinyltransferase MetX | - |
| A7317_RS27430 (A7317_27400) | - | 6132224..6132811 (-) | 588 | WP_024077908.1 | YggT family protein | - |
| A7317_RS27435 (A7317_27405) | proC | 6132836..6133654 (-) | 819 | WP_024077907.1 | pyrroline-5-carboxylate reductase | - |
| A7317_RS27440 (A7317_27410) | - | 6133688..6134374 (-) | 687 | WP_024077906.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| A7317_RS27445 (A7317_27415) | pilT | 6134432..6135466 (+) | 1035 | WP_069077198.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| A7317_RS27450 (A7317_27420) | - | 6135608..6136243 (-) | 636 | WP_024077904.1 | C40 family peptidase | - |
| A7317_RS27455 (A7317_27425) | - | 6136494..6136922 (+) | 429 | WP_024077903.1 | NINE protein | - |
| A7317_RS27460 (A7317_27430) | - | 6136989..6138260 (-) | 1272 | WP_069077199.1 | dihydroorotase | - |
| A7317_RS27465 (A7317_27435) | - | 6138257..6139261 (-) | 1005 | WP_024077901.1 | aspartate carbamoyltransferase catalytic subunit | - |
| A7317_RS27470 (A7317_27440) | pyrR | 6139286..6139792 (-) | 507 | WP_024077900.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| A7317_RS27475 (A7317_27445) | ruvX | 6139876..6140313 (-) | 438 | WP_003195067.1 | Holliday junction resolvase RuvX | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37496.34 Da Isoelectric Point: 6.6687
>NTDB_id=181581 A7317_RS27445 WP_069077198.1 6134432..6135466(+) (pilT) [Pseudomonas fluorescens strain L321]
MDITELLAHSVRQGASDLHLSAGLAPMLRVDGEVWPLDWPVLAPAQVANLLSPLLNQYQQKDFETSLETDFAFELPGVAR
FRVNVFQQARGMGAVFRTLAAEVQSLEALGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDYLNQHRRQHILTLED
PIEFIHTPKMALINQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTVDRL
VDVFPAGEKAMVRTMLSESLQAVVSQVLVKKLGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGAALGMKTLDMSL
KALVTEGVISREEAREKARVPGDI
MDITELLAHSVRQGASDLHLSAGLAPMLRVDGEVWPLDWPVLAPAQVANLLSPLLNQYQQKDFETSLETDFAFELPGVAR
FRVNVFQQARGMGAVFRTLAAEVQSLEALGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDYLNQHRRQHILTLED
PIEFIHTPKMALINQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTVDRL
VDVFPAGEKAMVRTMLSESLQAVVSQVLVKKLGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGAALGMKTLDMSL
KALVTEGVISREEAREKARVPGDI
Nucleotide
Download Length: 1035 bp
>NTDB_id=181581 A7317_RS27445 WP_069077198.1 6134432..6135466(+) (pilT) [Pseudomonas fluorescens strain L321]
ATGGATATCACTGAATTACTGGCGCACAGCGTACGCCAGGGCGCCTCCGACCTGCATCTGTCGGCTGGCCTGGCGCCGAT
GCTGCGGGTGGACGGTGAGGTATGGCCGTTGGATTGGCCGGTACTGGCACCTGCCCAAGTGGCTAACTTATTGAGCCCTT
TGCTCAACCAATACCAACAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAACTGCCCGGTGTGGCGCGG
TTCCGGGTCAATGTATTTCAGCAGGCGCGCGGTATGGGGGCGGTGTTTCGCACGCTTGCAGCCGAGGTCCAGAGCTTGGA
AGCCCTTGGCCTGGGGGAGGTGTTCCAGCGTATTGCCCAGTTGCCGCGCGGCCTGGTACTGGTGACCGGGCCCACCGGCT
CCGGCAAGTCCACCACCCTGGCGGCGATGATCGACTACCTCAATCAGCATCGGCGCCAGCACATCCTCACCCTCGAAGAC
CCTATCGAGTTTATCCATACGCCGAAAATGGCCCTGATCAACCAGCGTCAGGTCCACCGCGACACCCACAGTTTTTCCAC
CGCCCTGCGTTCGGCCCTGCGGGAAGACCCTGATGTGATCCTTGTGGGCGAATTGCGCGACCTGGAAACCATTCGCCTGG
CGCTGACGGCCGCTGAGACCGGCCACCTGGTCTTTGGCACCCTGCACACCACCTCGGCGGCAAAGACCGTGGACAGGCTG
GTGGACGTGTTCCCGGCGGGGGAAAAGGCCATGGTCCGCACCATGCTGTCTGAGTCGCTGCAAGCGGTGGTGTCACAGGT
GTTGGTCAAGAAGCTCGGCGGTGGGCGGGTGGCCGCCCATGAAATCATGTTGGGCACGCCAGCCATCCGTAACTTGATCC
GCGAAGACAAGGTGGCGCAGATGGTCTCGGCGATTCAGACCGGTGCAGCGTTGGGGATGAAAACCTTGGATATGAGTTTG
AAGGCGTTGGTCACGGAAGGCGTGATCAGCCGGGAAGAGGCGCGGGAGAAGGCGAGGGTACCTGGGGATATCTGA
ATGGATATCACTGAATTACTGGCGCACAGCGTACGCCAGGGCGCCTCCGACCTGCATCTGTCGGCTGGCCTGGCGCCGAT
GCTGCGGGTGGACGGTGAGGTATGGCCGTTGGATTGGCCGGTACTGGCACCTGCCCAAGTGGCTAACTTATTGAGCCCTT
TGCTCAACCAATACCAACAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAACTGCCCGGTGTGGCGCGG
TTCCGGGTCAATGTATTTCAGCAGGCGCGCGGTATGGGGGCGGTGTTTCGCACGCTTGCAGCCGAGGTCCAGAGCTTGGA
AGCCCTTGGCCTGGGGGAGGTGTTCCAGCGTATTGCCCAGTTGCCGCGCGGCCTGGTACTGGTGACCGGGCCCACCGGCT
CCGGCAAGTCCACCACCCTGGCGGCGATGATCGACTACCTCAATCAGCATCGGCGCCAGCACATCCTCACCCTCGAAGAC
CCTATCGAGTTTATCCATACGCCGAAAATGGCCCTGATCAACCAGCGTCAGGTCCACCGCGACACCCACAGTTTTTCCAC
CGCCCTGCGTTCGGCCCTGCGGGAAGACCCTGATGTGATCCTTGTGGGCGAATTGCGCGACCTGGAAACCATTCGCCTGG
CGCTGACGGCCGCTGAGACCGGCCACCTGGTCTTTGGCACCCTGCACACCACCTCGGCGGCAAAGACCGTGGACAGGCTG
GTGGACGTGTTCCCGGCGGGGGAAAAGGCCATGGTCCGCACCATGCTGTCTGAGTCGCTGCAAGCGGTGGTGTCACAGGT
GTTGGTCAAGAAGCTCGGCGGTGGGCGGGTGGCCGCCCATGAAATCATGTTGGGCACGCCAGCCATCCGTAACTTGATCC
GCGAAGACAAGGTGGCGCAGATGGTCTCGGCGATTCAGACCGGTGCAGCGTTGGGGATGAAAACCTTGGATATGAGTTTG
AAGGCGTTGGTCACGGAAGGCGTGATCAGCCGGGAAGAGGCGCGGGAGAAGGCGAGGGTACCTGGGGATATCTGA
Similar proteins
Only experimentally validated proteins are listed.