Detailed information NTG0176120

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: A4F89_RS11805
• Genome accession: NZ_CP015016
• Coordinates: 2344782..2345471 (+)
• Length: 229 a.a.
• NCBI ID: WP_071539895.1
• Uniprot ID: -
• Organism: Polynucleobacter asymbioticus strain MWH-RechtKolB
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 2339782..2350471

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A4F89_RS11785 (A4F89_11720)	-	2341267..2341848 (-)	582	WP_011903910.1	DUF4390 domain-containing protein	-
A4F89_RS11790 (A4F89_11725)	rsmB	2341845..2343161 (-)	1317	WP_071539894.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
A4F89_RS11795 (A4F89_11730)	fmt	2343187..2344185 (-)	999	WP_071467007.1	methionyl-tRNA formyltransferase	-
A4F89_RS11800 (A4F89_11735)	def	2344195..2344710 (-)	516	WP_011903913.1	peptide deformylase	-
A4F89_RS11805 (A4F89_11740)	dprA	2344782..2345471 (+)	690	WP_071539895.1	DNA-processing protein DprA	Machinery gene
A4F89_RS11810 (A4F89_11745)	-	2345676..2348348 (+)	2673	WP_234397295.1	DNA topoisomerase III	-
A4F89_RS12325	mnmC	2348408..2349409 (-)	1002	Protein_2334	FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	-

Sequence

Protein

• Length: 229 a.a.
• Molecular weight: 24351.36 Da
• Isoelectric Point: 9.3153

>NTDB_id=176120 A4F89_RS11805 WP_071539895.1 2344782..2345471(+) (dprA) [Polynucleobacter asymbioticus strain MWH-RechtKolB]
MHIPITPKTIQEIQRGSKNYPLRLNDLPDPPSCLYIYGNIHLLSAPMVAIVGSRKASMEGLKVSRLFARALSKAGLLVVS
GLARGIDGAAHIGAMSLGTDYQTAAVCGTGLDMAYPKEHAALANAIGNQGLLISEYPAGTGPKPYHFPRRNRIIAALSLG
VVVIEAAERSGSLITARLAAELGREVFALPGPIYNPLFGGCHQLIQQGAKLARNPDDVLEELIIPKNPF

Nucleotide

• Length: 690 bp

>NTDB_id=176120 A4F89_RS11805 WP_071539895.1 2344782..2345471(+) (dprA) [Polynucleobacter asymbioticus strain MWH-RechtKolB]
ATGCATATCCCGATTACCCCAAAAACCATTCAGGAAATTCAGAGGGGTAGCAAAAATTACCCTCTTAGACTTAACGATCT
GCCAGACCCTCCGTCATGCCTCTATATATACGGGAATATTCACCTCCTGAGCGCTCCCATGGTTGCCATTGTGGGTTCCC
GTAAAGCCAGCATGGAAGGGCTAAAAGTATCTCGTCTATTTGCTAGAGCTCTTTCAAAAGCGGGCCTACTCGTTGTTTCT
GGGCTTGCTAGAGGCATTGATGGTGCGGCACACATTGGCGCGATGAGTCTAGGAACCGATTACCAAACAGCAGCAGTATG
TGGCACAGGGTTAGATATGGCCTATCCCAAGGAGCACGCTGCCCTAGCCAATGCGATTGGCAATCAAGGACTCTTAATCT
CTGAATACCCTGCCGGAACCGGCCCAAAACCTTACCATTTTCCCCGACGAAACCGAATCATTGCTGCCCTCTCCTTGGGG
GTAGTTGTCATTGAAGCCGCCGAAAGATCGGGCTCCCTGATTACAGCGCGCCTTGCTGCTGAGCTGGGAAGAGAGGTATT
TGCCCTTCCGGGCCCTATTTACAACCCCCTTTTTGGAGGATGTCATCAACTTATTCAACAGGGAGCTAAATTGGCACGTA
ATCCAGACGATGTCTTAGAAGAGCTTATTATTCCTAAAAACCCATTTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (10-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Vibrio cholerae strain A1552	54.187	88.646	0.48
dprA	Legionella pneumophila strain ERS1305867	51.905	91.703	0.476
dprA	Neisseria meningitidis strain C311	48.848	94.76	0.463
dprA	Neisseria meningitidis MC58	48.848	94.76	0.463
dprA	Neisseria gonorrhoeae MS11	48.387	94.76	0.459
dprA	Neisseria gonorrhoeae strain FA1090	48.387	94.76	0.459
dprA	Vibrio campbellii strain DS40M4	50.739	88.646	0.45
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	50.739	88.646	0.45
dprA/cilB/dalA	Streptococcus pneumoniae D39	50.739	88.646	0.45
dprA/cilB/dalA	Streptococcus pneumoniae R6	50.739	88.646	0.45
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	50.739	88.646	0.45
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	50.739	88.646	0.45
dprA/cilB/dalA	Streptococcus mitis SK321	50.246	88.646	0.445
dprA	Acinetobacter baumannii strain A118	49.275	90.393	0.445
dprA	Thermus thermophilus HB27	47.642	92.576	0.441
dprA	Streptococcus mutans UA159	49.029	89.956	0.441
dprA	Acinetobacter baumannii D1279779	48.792	90.393	0.441
dprA	Acinetobacter baylyi ADP1	47.847	91.266	0.437
dprA	Glaesserella parasuis strain SC1401	48.293	89.52	0.432
dprA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	44	98.253	0.432
dprA	Lactococcus lactis subsp. cremoris KW2	48.039	89.083	0.428
dprA	Haemophilus influenzae Rd KW20	47.549	89.083	0.424
dprA	Bacillus subtilis subsp. subtilis str. 168	43.458	93.45	0.406
dprA	Staphylococcus aureus MW2	41.546	90.393	0.376
dprA	Staphylococcus aureus N315	41.546	90.393	0.376