Detailed information NTG1120371

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: EL092_RS08530
• Genome accession: NZ_LR134291
• Coordinates: 1770231..1770713 (-)
• Length: 160 a.a.
• NCBI ID: WP_012130755.1
• Uniprot ID: Q6XLQ2
• Organism: Streptococcus gordonii strain NCTC7868
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1765231..1775713

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL092_RS08530 (NCTC7868_01704)	comR/comR2	1770231..1770713 (-)	483	WP_012130755.1	sigma-70 family RNA polymerase sigma factor	Regulator
EL092_RS08535 (NCTC7868_01705)	amiF	1770915..1771838 (-)	924	WP_012130756.1	ATP-binding cassette domain-containing protein	Regulator
EL092_RS08540 (NCTC7868_01706)	amiE	1771849..1772916 (-)	1068	WP_008809622.1	ABC transporter ATP-binding protein	Regulator
EL092_RS08545 (NCTC7868_01707)	amiD	1772925..1773851 (-)	927	WP_008809623.1	oligopeptide ABC transporter permease OppC	Regulator
EL092_RS08550 (NCTC7868_01708)	amiC	1773851..1775347 (-)	1497	WP_008809624.1	ABC transporter permease	Regulator

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 19950.92 Da
• Isoelectric Point: 9.6140

>NTDB_id=1120371 EL092_RS08530 WP_012130755.1 1770231..1770713(-) (comR/comR2) [Streptococcus gordonii strain NCTC7868]
MKFEDVYKQVEGIVKRCYKDYYLHLWEYADWRQEGMLVLYELLKSHPNLLEDQPRLYRYFKTKFRNRIHDLIRRQESQKR
KLDRQPYEEVSEIGHRLRMKELYLDELVAFRSAMSEYRSRLSPEEAKQYERLMADERFKGRKAMLKDLSYHLRDFNPRLD

Nucleotide

• Length: 483 bp

>NTDB_id=1120371 EL092_RS08530 WP_012130755.1 1770231..1770713(-) (comR/comR2) [Streptococcus gordonii strain NCTC7868]
ATGAAGTTTGAGGACGTATACAAACAAGTTGAAGGGATAGTCAAGCGATGTTATAAAGATTATTATCTGCACTTATGGGA
GTATGCAGATTGGAGGCAGGAAGGGATGTTGGTGTTGTACGAATTGTTAAAAAGTCACCCCAACCTACTAGAAGATCAAC
CACGACTGTACCGTTACTTCAAGACCAAGTTTCGGAACAGAATTCATGATTTGATTCGTCGCCAAGAGAGTCAAAAACGG
AAATTGGACAGGCAACCCTATGAAGAGGTCAGCGAGATAGGTCATCGTTTAAGAATGAAAGAGCTTTATCTAGATGAACT
GGTAGCCTTTAGAAGTGCCATGTCAGAGTATAGAAGCCGTCTCAGCCCAGAAGAGGCAAAACAATATGAGCGTCTGATGG
CAGATGAAAGATTCAAAGGACGTAAGGCAATGCTCAAAGATCTGTCTTATCACTTAAGGGATTTCAATCCCCGTTTAGAT
TAA

Domains

No domain identified.

3D structure

• AlphaFold DB: Q6XLQ2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	100	100	1
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	100	100	1
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	50	97.5	0.488
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	49.359	97.5	0.481
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	49.359	97.5	0.481
comX/comX1	Streptococcus pneumoniae TIGR4	48.718	97.5	0.475
comX/comX2	Streptococcus pneumoniae Rx1	48.718	97.5	0.475
comX/comX1	Streptococcus pneumoniae Rx1	48.718	97.5	0.475
comX/comX2	Streptococcus pneumoniae D39	48.718	97.5	0.475
comX/comX1	Streptococcus pneumoniae D39	48.718	97.5	0.475
comX/comX1	Streptococcus pneumoniae R6	48.718	97.5	0.475
comX/comX2	Streptococcus pneumoniae R6	48.718	97.5	0.475
comX/comX2	Streptococcus pneumoniae TIGR4	48.718	97.5	0.475
comX/sigX	Streptococcus suis isolate S10	49.032	96.875	0.475
comX/sigX	Streptococcus suis P1/7	49.032	96.875	0.475
comX/sigX	Streptococcus suis D9	49.032	96.875	0.475
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	48.077	97.5	0.469
comX/sigX	Streptococcus mutans UA159	47.436	97.5	0.463
comX	Streptococcus salivarius SK126	43.226	96.875	0.419
comX/sigX	Streptococcus salivarius strain HSISS4	43.226	96.875	0.419
comX	Streptococcus thermophilus LMG 18311	42.581	96.875	0.413
comX	Streptococcus thermophilus LMD-9	42.581	96.875	0.413
comX	Streptococcus sobrinus strain NIDR 6715-7	42.208	96.25	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	40.909	96.25	0.394
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	40.909	96.25	0.394
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	39.873	98.75	0.394
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	40.26	96.25	0.388
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	40.26	96.25	0.388
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	40.26	96.25	0.388
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	40.26	96.25	0.388