Detailed information NTG1103383

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: ACNH6B_RS01050
• Genome accession: NZ_CP182944
• Coordinates: 225018..225461 (-)
• Length: 147 a.a.
• NCBI ID: WP_418357950.1
• Uniprot ID: -
• Organism: Shewanella basaltis strain KCTC 22121
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 220018..230461

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACNH6B_RS01030 (ACNH6B_01030)	coaE	220227..220856 (-)	630	WP_418357946.1	dephospho-CoA kinase	-
ACNH6B_RS01035 (ACNH6B_01035)	pilD	220853..221779 (-)	927	WP_418357947.1	prepilin peptidase	Machinery gene
ACNH6B_RS01040 (ACNH6B_01040)	pilC	221800..223065 (-)	1266	WP_418357948.1	type II secretion system F family protein	Machinery gene
ACNH6B_RS01045 (ACNH6B_01045)	pilB	223220..224926 (-)	1707	WP_418357949.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACNH6B_RS01050 (ACNH6B_01050)	pilE	225018..225461 (-)	444	WP_418357950.1	pilin	Machinery gene
ACNH6B_RS01055 (ACNH6B_01055)	nadC	226295..227173 (-)	879	WP_248970760.1	carboxylating nicotinate-nucleotide diphosphorylase	-
ACNH6B_RS01060 (ACNH6B_01060)	ampD	227370..227942 (+)	573	WP_418357951.1	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	-
ACNH6B_RS01065 (ACNH6B_01065)	ampE	228241..229092 (+)	852	WP_418357952.1	beta-lactamase regulator AmpE	-
ACNH6B_RS01070 (ACNH6B_01070)	pdhR	229530..230282 (+)	753	WP_248970763.1	pyruvate dehydrogenase complex transcriptional repressor PdhR	-

Sequence

Protein

• Length: 147 a.a.
• Molecular weight: 15029.27 Da
• Isoelectric Point: 5.0640

>NTDB_id=1103383 ACNH6B_RS01050 WP_418357950.1 225018..225461(-) (pilE) [Shewanella basaltis strain KCTC 22121]
MKGINQIKNAKGFTLIELMIVVAIIGILAAIALPAYQDFTKRGHVSEGLSLAAGAKAAVTEYYSTEGAFPSSNGDAGIAP
KANIVGNAVTGVEVIANGVIEVTFNSKVAAGAVLLLTPTDSTGSVTWVCSAKDSTVLEDAFLPSNCR

Nucleotide

• Length: 444 bp

>NTDB_id=1103383 ACNH6B_RS01050 WP_418357950.1 225018..225461(-) (pilE) [Shewanella basaltis strain KCTC 22121]
ATGAAAGGTATCAACCAAATCAAAAACGCTAAGGGTTTTACTCTTATTGAATTAATGATCGTAGTCGCGATCATCGGTAT
TCTTGCTGCAATCGCACTACCTGCTTATCAAGATTTTACTAAACGTGGTCATGTATCTGAAGGTTTAAGTTTAGCTGCTG
GAGCGAAAGCCGCAGTAACTGAATATTATTCAACTGAAGGCGCTTTTCCTTCTTCTAACGGTGATGCAGGAATAGCTCCT
AAGGCTAATATTGTCGGTAATGCAGTAACGGGTGTCGAAGTTATTGCTAATGGCGTAATTGAAGTAACCTTTAACTCAAA
AGTTGCAGCAGGTGCGGTTTTACTTCTAACACCAACTGACTCTACCGGCAGTGTTACTTGGGTGTGTTCAGCAAAAGATT
CAACTGTACTAGAAGATGCTTTCCTTCCATCTAACTGTCGCTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (8-33)

• Pilin (bacterial filament) (Pilin) (42-147)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Neisseria gonorrhoeae MS11	47.436	100	0.503
pilE	Neisseria gonorrhoeae strain FA1090	46.753	100	0.49
pilA2	Legionella pneumophila strain ERS1305867	48.201	94.558	0.456
pilA2	Legionella pneumophila str. Paris	48.201	94.558	0.456
pilA	Ralstonia pseudosolanacearum GMI1000	39.053	100	0.449
comP	Acinetobacter baylyi ADP1	45.205	99.32	0.449
pilA	Vibrio campbellii strain DS40M4	39.735	100	0.408
pilA/pilA1	Eikenella corrodens VA1	37.662	100	0.395
pilA	Haemophilus influenzae 86-028NP	38.776	100	0.388
pilA	Acinetobacter baumannii strain A118	39.86	97.279	0.388
pilA	Vibrio cholerae C6706	37.415	100	0.374
pilA	Vibrio cholerae strain A1552	37.415	100	0.374
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	37.415	100	0.374
pilA	Pseudomonas aeruginosa PAK	34.839	100	0.367
pilA	Haemophilus influenzae Rd KW20	39.416	93.197	0.367
pilA/pilAI	Pseudomonas stutzeri DSM 10701	37.857	95.238	0.361