Detailed information NTG1040007

Bioinformatically predicted

Overview

• Name: pilA2
• Type: Machinery gene
• Locus tag: ACDH70_RS18165
• Genome accession: NZ_CP167865
• Coordinates: 4264470..4264877 (+)
• Length: 135 a.a.
• NCBI ID: WP_228963900.1
• Uniprot ID: -
• Organism: Xanthomonas axonopodis pv. poinsettiicola strain NCPPB:1939
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4259470..4269877

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACDH70_RS18150 (ACDH70_18150)	coaE	4261333..4261974 (-)	642	WP_228963906.1	dephospho-CoA kinase	-
ACDH70_RS18155 (ACDH70_18155)	-	4261988..4262851 (-)	864	WP_228963904.1	A24 family peptidase	-
ACDH70_RS18160 (ACDH70_18160)	pilC	4262858..4264117 (-)	1260	WP_228963903.1	type II secretion system F family protein	Machinery gene
ACDH70_RS18165 (ACDH70_18165)	pilA2	4264470..4264877 (+)	408	WP_228963900.1	pilin	Machinery gene
ACDH70_RS18170 (ACDH70_18170)	-	4264959..4266863 (+)	1905	WP_228963898.1	hypothetical protein	-
ACDH70_RS18175 (ACDH70_18175)	-	4266878..4267330 (+)	453	WP_228963894.1	GtrA family protein	-
ACDH70_RS18180 (ACDH70_18180)	-	4267323..4268867 (+)	1545	WP_228963893.1	NAD(P)/FAD-dependent oxidoreductase	-

Sequence

Protein

• Length: 135 a.a.
• Molecular weight: 13904.94 Da
• Isoelectric Point: 9.0169

>NTDB_id=1040007 ACDH70_RS18165 WP_228963900.1 4264470..4264877(+) (pilA2) [Xanthomonas axonopodis pv. poinsettiicola strain NCPPB:1939]
MKKQQGFTLIELMIVVAIIAILAAIALPAYQDYLVKSRVSEVVLAASSARTTVSEAAAADTGANMPATVNIETQSSKYVS
GITYANGVITATAKDLGGSTPTGTITLTGTKSANGQVNWVCSGTIASKYRPSTCQ

Nucleotide

• Length: 408 bp

>NTDB_id=1040007 ACDH70_RS18165 WP_228963900.1 4264470..4264877(+) (pilA2) [Xanthomonas axonopodis pv. poinsettiicola strain NCPPB:1939]
ATGAAGAAGCAACAAGGTTTTACCCTGATCGAATTGATGATTGTTGTTGCGATCATTGCCATTCTGGCGGCTATCGCATT
GCCTGCTTATCAAGATTATCTGGTCAAGTCACGTGTGTCGGAAGTTGTACTGGCTGCCTCGTCGGCTCGCACCACTGTCT
CGGAGGCTGCCGCTGCTGACACCGGCGCGAACATGCCGGCGACTGTGAATATCGAGACCCAGTCTTCCAAGTATGTGTCG
GGCATCACGTATGCTAATGGCGTGATCACCGCCACTGCCAAGGATCTGGGCGGCAGTACCCCCACTGGCACGATTACGCT
TACCGGTACCAAGAGTGCCAACGGCCAGGTCAATTGGGTGTGCAGTGGCACCATCGCCTCTAAGTACCGCCCGTCTACCT
GCCAGTAA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (35-135)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	35.204	100	0.511
pilA2	Legionella pneumophila strain ERS1305867	49.635	100	0.504
pilA2	Legionella pneumophila str. Paris	49.635	100	0.504
comP	Acinetobacter baylyi ADP1	44	100	0.489
pilA	Ralstonia pseudosolanacearum GMI1000	40.252	100	0.474
pilA/pilA1	Eikenella corrodens VA1	40.132	100	0.452
pilE	Neisseria gonorrhoeae MS11	36.25	100	0.43
pilE	Neisseria gonorrhoeae strain FA1090	35.669	100	0.415
pilA/pilAI	Pseudomonas stutzeri DSM 10701	40.876	100	0.415
pilA	Haemophilus influenzae 86-028NP	38.571	100	0.4
pilA/pilAII	Pseudomonas stutzeri DSM 10701	38.235	100	0.385
pilA	Acinetobacter baumannii strain A118	36.879	100	0.385
pilA	Haemophilus influenzae Rd KW20	36.429	100	0.378
pilA	Vibrio cholerae C6706	32.903	100	0.378
pilA	Vibrio cholerae strain A1552	32.903	100	0.378
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	32.903	100	0.378
pilA	Vibrio parahaemolyticus RIMD 2210633	38.76	95.556	0.37
pilA	Glaesserella parasuis strain SC1401	34.752	100	0.363