Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | AB7933_RS31520 | Genome accession | NZ_CP167125 |
| Coordinates | 6877248..6878282 (-) | Length | 344 a.a. |
| NCBI ID | WP_024077905.1 | Uniprot ID | - |
| Organism | Pseudomonas sp. NT2 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6872248..6883282
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB7933_RS31490 (AB7933_31510) | ruvX | 6872403..6872840 (+) | 438 | WP_003195067.1 | Holliday junction resolvase RuvX | - |
| AB7933_RS31495 (AB7933_31515) | pyrR | 6872924..6873430 (+) | 507 | WP_024077900.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| AB7933_RS31500 (AB7933_31520) | - | 6873455..6874459 (+) | 1005 | WP_024077901.1 | aspartate carbamoyltransferase catalytic subunit | - |
| AB7933_RS31505 (AB7933_31525) | - | 6874456..6875727 (+) | 1272 | WP_024077902.1 | dihydroorotase | - |
| AB7933_RS31510 (AB7933_31530) | - | 6875794..6876222 (-) | 429 | WP_024077903.1 | TM2 domain-containing protein | - |
| AB7933_RS31515 (AB7933_31535) | - | 6876473..6877108 (+) | 636 | WP_024077904.1 | C40 family peptidase | - |
| AB7933_RS31520 (AB7933_31540) | pilT | 6877248..6878282 (-) | 1035 | WP_024077905.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| AB7933_RS31525 (AB7933_31545) | - | 6878340..6879026 (+) | 687 | WP_024077906.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| AB7933_RS31530 (AB7933_31550) | proC | 6879060..6879878 (+) | 819 | WP_024077907.1 | pyrroline-5-carboxylate reductase | - |
| AB7933_RS31535 (AB7933_31555) | - | 6879903..6880490 (+) | 588 | WP_024077908.1 | YggT family protein | - |
| AB7933_RS31540 (AB7933_31560) | - | 6880616..6881755 (+) | 1140 | WP_024077909.1 | homoserine O-acetyltransferase | - |
| AB7933_RS31545 (AB7933_31565) | metW | 6881763..6882383 (+) | 621 | WP_024077910.1 | methionine biosynthesis protein MetW | - |
| AB7933_RS31550 (AB7933_31570) | - | 6882405..6882839 (+) | 435 | WP_024077911.1 | DUF4426 domain-containing protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37482.31 Da Isoelectric Point: 6.6687
>NTDB_id=1038493 AB7933_RS31520 WP_024077905.1 6877248..6878282(-) (pilT) [Pseudomonas sp. NT2]
MDITELLAHSVRQGASDLHLSAGLAPMLRVDGEVWPLDWPVLAPAQVANLLSPLLNQYQQKDFETSLETDFAFELPGVAR
FRVNVFQQARGMGAVFRTLAAEVQSLEALGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDYLNQHRRQHILTLED
PVEFIHTPKMALINQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTVDRL
VDVFPAGEKAMVRTMLSESLQAVVSQVLVKKLGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGAALGMKTLDMSL
KALVTEGVISREEAREKARVPGDI
MDITELLAHSVRQGASDLHLSAGLAPMLRVDGEVWPLDWPVLAPAQVANLLSPLLNQYQQKDFETSLETDFAFELPGVAR
FRVNVFQQARGMGAVFRTLAAEVQSLEALGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDYLNQHRRQHILTLED
PVEFIHTPKMALINQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTVDRL
VDVFPAGEKAMVRTMLSESLQAVVSQVLVKKLGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGAALGMKTLDMSL
KALVTEGVISREEAREKARVPGDI
Nucleotide
Download Length: 1035 bp
>NTDB_id=1038493 AB7933_RS31520 WP_024077905.1 6877248..6878282(-) (pilT) [Pseudomonas sp. NT2]
ATGGATATCACTGAATTACTGGCGCACAGCGTACGCCAGGGCGCCTCCGACCTGCATCTGTCGGCTGGCCTGGCGCCGAT
GCTGCGGGTGGACGGTGAGGTATGGCCGTTGGATTGGCCGGTACTGGCACCTGCCCAAGTGGCTAACTTATTGAGCCCTT
TGCTCAACCAATACCAACAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAACTGCCCGGTGTGGCGCGG
TTCCGGGTCAATGTATTTCAGCAGGCGCGCGGTATGGGGGCGGTGTTTCGCACGCTTGCAGCCGAGGTCCAGAGCTTGGA
AGCCCTTGGCCTGGGGGAGGTGTTCCAGCGTATTGCCCAGTTGCCGCGCGGCCTGGTACTGGTGACCGGACCCACCGGCT
CCGGCAAGTCCACCACCCTGGCGGCGATGATCGACTACCTCAATCAGCATCGGCGCCAGCACATCCTCACCCTCGAAGAC
CCTGTCGAGTTTATCCATACGCCGAAAATGGCCCTGATCAACCAGCGTCAGGTCCACCGCGACACCCACAGTTTTTCCAC
CGCCCTGCGTTCGGCCCTGCGGGAAGACCCGGATGTGATCCTTGTGGGCGAATTGCGCGACCTGGAAACCATTCGCCTGG
CGCTGACGGCCGCTGAGACCGGCCACCTGGTCTTTGGCACCCTGCACACCACCTCGGCGGCAAAGACCGTGGACAGGCTG
GTGGACGTGTTCCCGGCGGGGGAAAAGGCCATGGTCCGCACCATGCTGTCTGAGTCGCTGCAAGCGGTGGTGTCACAGGT
GTTGGTCAAGAAGCTCGGCGGTGGGCGGGTGGCCGCCCATGAAATCATGTTGGGCACGCCAGCCATCCGTAACTTGATCC
GCGAAGACAAGGTGGCGCAGATGGTCTCGGCGATTCAGACCGGTGCAGCGTTGGGGATGAAAACCTTGGATATGAGTTTG
AAGGCGTTGGTCACGGAAGGCGTGATCAGTCGGGAAGAGGCGCGGGAGAAGGCGAGGGTACCTGGGGATATCTGA
ATGGATATCACTGAATTACTGGCGCACAGCGTACGCCAGGGCGCCTCCGACCTGCATCTGTCGGCTGGCCTGGCGCCGAT
GCTGCGGGTGGACGGTGAGGTATGGCCGTTGGATTGGCCGGTACTGGCACCTGCCCAAGTGGCTAACTTATTGAGCCCTT
TGCTCAACCAATACCAACAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAACTGCCCGGTGTGGCGCGG
TTCCGGGTCAATGTATTTCAGCAGGCGCGCGGTATGGGGGCGGTGTTTCGCACGCTTGCAGCCGAGGTCCAGAGCTTGGA
AGCCCTTGGCCTGGGGGAGGTGTTCCAGCGTATTGCCCAGTTGCCGCGCGGCCTGGTACTGGTGACCGGACCCACCGGCT
CCGGCAAGTCCACCACCCTGGCGGCGATGATCGACTACCTCAATCAGCATCGGCGCCAGCACATCCTCACCCTCGAAGAC
CCTGTCGAGTTTATCCATACGCCGAAAATGGCCCTGATCAACCAGCGTCAGGTCCACCGCGACACCCACAGTTTTTCCAC
CGCCCTGCGTTCGGCCCTGCGGGAAGACCCGGATGTGATCCTTGTGGGCGAATTGCGCGACCTGGAAACCATTCGCCTGG
CGCTGACGGCCGCTGAGACCGGCCACCTGGTCTTTGGCACCCTGCACACCACCTCGGCGGCAAAGACCGTGGACAGGCTG
GTGGACGTGTTCCCGGCGGGGGAAAAGGCCATGGTCCGCACCATGCTGTCTGAGTCGCTGCAAGCGGTGGTGTCACAGGT
GTTGGTCAAGAAGCTCGGCGGTGGGCGGGTGGCCGCCCATGAAATCATGTTGGGCACGCCAGCCATCCGTAACTTGATCC
GCGAAGACAAGGTGGCGCAGATGGTCTCGGCGATTCAGACCGGTGCAGCGTTGGGGATGAAAACCTTGGATATGAGTTTG
AAGGCGTTGGTCACGGAAGGCGTGATCAGTCGGGAAGAGGCGCGGGAGAAGGCGAGGGTACCTGGGGATATCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.