Detailed information NTG0989156

Bioinformatically predicted

Overview

• Name: comX/sigX/comX2/sigX2
• Type: Regulator
• Locus tag: AAFQ93_RS02590
• Genome accession: NZ_CP152419
• Coordinates: 522388..522852 (+)
• Length: 154 a.a.
• NCBI ID: WP_223140429.1
• Uniprot ID: -
• Organism: Streptococcus nidrosiense strain SO-23-1
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 517388..527852

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAFQ93_RS02575 (AAFQ93_02580)	-	517667..518923 (-)	1257	WP_045763715.1	ISL3 family transposase	-
AAFQ93_RS02580 (AAFQ93_02585)	-	519027..519902 (-)	876	WP_375555509.1	RluA family pseudouridine synthase	-
AAFQ93_RS02585 (AAFQ93_02590)	pbp2a	519991..522216 (+)	2226	WP_223140428.1	penicillin-binding protein PBP2A	-
AAFQ93_RS02590 (AAFQ93_02595)	comX/sigX/comX2/sigX2	522388..522852 (+)	465	WP_223140429.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 154 a.a.
• Molecular weight: 19062.83 Da
• Isoelectric Point: 6.9728

>NTDB_id=989156 AAFQ93_RS02590 WP_223140429.1 522388..522852(+) (comX/sigX/comX2/sigX2) [Streptococcus nidrosiense strain SO-23-1]
MLEKYYAKVKGIVHKCRKDYYLHLWEKEDWDQEGMICLHELLEKDPELVEEEKKLYIYFKTKFRNRILDSVRKQESQKRR
LDRMAYEEVGEISHRLPEGGLWLDDYYALHELLNTYRRKLPEDKQEAYDRLWADERFKGRKALLRELKETLQDF

Nucleotide

• Length: 465 bp

>NTDB_id=989156 AAFQ93_RS02590 WP_223140429.1 522388..522852(+) (comX/sigX/comX2/sigX2) [Streptococcus nidrosiense strain SO-23-1]
ATGCTTGAGAAGTATTATGCAAAGGTAAAAGGAATTGTTCATAAATGTAGAAAAGACTACTATCTCCACCTGTGGGAGAA
AGAGGATTGGGATCAAGAAGGCATGATCTGTCTCCATGAACTTCTAGAAAAGGATCCAGAACTAGTGGAAGAAGAAAAGA
AACTCTACATCTACTTCAAAACAAAATTTCGCAATCGAATCCTTGATAGCGTCAGAAAACAAGAGAGTCAAAAGCGTCGC
CTAGACCGGATGGCCTATGAAGAAGTAGGGGAGATTAGCCATCGCCTACCAGAAGGAGGATTGTGGTTGGATGATTACTA
CGCCCTTCATGAATTGTTGAATACTTATAGAAGAAAATTACCAGAAGATAAACAAGAAGCTTACGACCGCCTCTGGGCAG
ACGAACGATTTAAAGGCCGCAAAGCCCTTCTCAGAGAGCTGAAGGAAACATTACAAGACTTCTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	62.338	100	0.623
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	61.039	100	0.61
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	61.039	100	0.61
comX/comX2	Streptococcus pneumoniae D39	59.091	100	0.591
comX/comX1	Streptococcus pneumoniae D39	59.091	100	0.591
comX/comX2	Streptococcus pneumoniae R6	59.091	100	0.591
comX/comX1	Streptococcus pneumoniae R6	59.091	100	0.591
comX/comX2	Streptococcus pneumoniae Rx1	59.091	100	0.591
comX/comX1	Streptococcus pneumoniae Rx1	59.091	100	0.591
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	59.091	100	0.591
comX/comX1	Streptococcus pneumoniae TIGR4	58.442	100	0.584
comX/comX2	Streptococcus pneumoniae TIGR4	58.442	100	0.584
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	56.209	99.351	0.558
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	56.209	99.351	0.558
comX/sigX	Streptococcus mutans UA159	50.98	99.351	0.506
comX/sigX	Streptococcus suis D9	49.673	99.351	0.494
comX/sigX	Streptococcus suis isolate S10	49.673	99.351	0.494
comX/sigX	Streptococcus suis P1/7	49.673	99.351	0.494
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	47.651	96.753	0.461
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	47.651	96.753	0.461
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	47.651	96.753	0.461
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	47.651	96.753	0.461
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	47.651	96.753	0.461
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	47.651	96.753	0.461
comX/sigX	Streptococcus salivarius strain HSISS4	44.966	96.753	0.435
comX	Streptococcus salivarius SK126	44.966	96.753	0.435
comX	Streptococcus sobrinus strain NIDR 6715-7	44	97.403	0.429
comX	Streptococcus thermophilus LMG 18311	43.046	98.052	0.422
comX	Streptococcus thermophilus LMD-9	43.046	98.052	0.422
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	41.558	100	0.416