Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | WLF14_RS28875 | Genome accession | NZ_CP151816 |
| Coordinates | 6332173..6333207 (-) | Length | 344 a.a. |
| NCBI ID | WP_024077905.1 | Uniprot ID | - |
| Organism | Pseudomonas fluorescens strain IMGN2 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6327173..6338207
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WLF14_RS28845 (WLF14_28845) | ruvX | 6327325..6327762 (+) | 438 | WP_342308500.1 | Holliday junction resolvase RuvX | - |
| WLF14_RS28850 (WLF14_28850) | pyrR | 6327846..6328352 (+) | 507 | WP_024077900.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| WLF14_RS28855 (WLF14_28855) | - | 6328377..6329381 (+) | 1005 | WP_024077901.1 | aspartate carbamoyltransferase catalytic subunit | - |
| WLF14_RS28860 (WLF14_28860) | - | 6329378..6330649 (+) | 1272 | WP_024077902.1 | dihydroorotase | - |
| WLF14_RS28865 (WLF14_28865) | - | 6330719..6331147 (-) | 429 | WP_024077903.1 | TM2 domain-containing protein | - |
| WLF14_RS28870 (WLF14_28870) | - | 6331398..6332033 (+) | 636 | WP_024077904.1 | C40 family peptidase | - |
| WLF14_RS28875 (WLF14_28875) | pilT | 6332173..6333207 (-) | 1035 | WP_024077905.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| WLF14_RS28880 (WLF14_28880) | - | 6333265..6333951 (+) | 687 | WP_024077906.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| WLF14_RS28885 (WLF14_28885) | proC | 6333985..6334803 (+) | 819 | WP_193689939.1 | pyrroline-5-carboxylate reductase | - |
| WLF14_RS28890 (WLF14_28890) | - | 6334828..6335415 (+) | 588 | WP_024077908.1 | YggT family protein | - |
| WLF14_RS28895 (WLF14_28895) | - | 6335541..6336680 (+) | 1140 | WP_024077909.1 | homoserine O-acetyltransferase | - |
| WLF14_RS28900 (WLF14_28900) | metW | 6336688..6337308 (+) | 621 | WP_024077910.1 | methionine biosynthesis protein MetW | - |
| WLF14_RS28905 (WLF14_28905) | - | 6337330..6337764 (+) | 435 | WP_024077911.1 | DUF4426 domain-containing protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37482.31 Da Isoelectric Point: 6.6687
>NTDB_id=981012 WLF14_RS28875 WP_024077905.1 6332173..6333207(-) (pilT) [Pseudomonas fluorescens strain IMGN2]
MDITELLAHSVRQGASDLHLSAGLAPMLRVDGEVWPLDWPVLAPAQVANLLSPLLNQYQQKDFETSLETDFAFELPGVAR
FRVNVFQQARGMGAVFRTLAAEVQSLEALGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDYLNQHRRQHILTLED
PVEFIHTPKMALINQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTVDRL
VDVFPAGEKAMVRTMLSESLQAVVSQVLVKKLGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGAALGMKTLDMSL
KALVTEGVISREEAREKARVPGDI
MDITELLAHSVRQGASDLHLSAGLAPMLRVDGEVWPLDWPVLAPAQVANLLSPLLNQYQQKDFETSLETDFAFELPGVAR
FRVNVFQQARGMGAVFRTLAAEVQSLEALGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDYLNQHRRQHILTLED
PVEFIHTPKMALINQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTVDRL
VDVFPAGEKAMVRTMLSESLQAVVSQVLVKKLGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGAALGMKTLDMSL
KALVTEGVISREEAREKARVPGDI
Nucleotide
Download Length: 1035 bp
>NTDB_id=981012 WLF14_RS28875 WP_024077905.1 6332173..6333207(-) (pilT) [Pseudomonas fluorescens strain IMGN2]
ATGGATATCACTGAATTACTGGCGCACAGCGTACGCCAGGGCGCCTCCGACCTGCATCTGTCGGCTGGCCTGGCGCCGAT
GCTGCGGGTGGACGGTGAGGTATGGCCGTTGGATTGGCCGGTACTGGCACCTGCCCAAGTGGCTAACTTATTGAGCCCTT
TGCTCAACCAATACCAACAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAACTGCCCGGTGTGGCGCGG
TTCCGGGTCAATGTATTTCAGCAGGCGCGCGGTATGGGGGCGGTGTTTCGCACGCTTGCAGCCGAGGTCCAGAGCTTGGA
AGCCCTTGGCCTGGGGGAGGTGTTCCAGCGTATTGCCCAGTTGCCGCGCGGCCTGGTACTGGTGACCGGGCCCACCGGCT
CCGGCAAGTCCACCACCCTGGCGGCGATGATCGACTACCTCAATCAGCATCGGCGCCAGCACATCCTCACCCTCGAAGAC
CCTGTCGAGTTTATCCACACGCCGAAAATGGCCCTGATCAACCAGCGTCAGGTCCACCGCGACACCCACAGTTTTTCCAC
CGCCCTGCGTTCGGCCCTGCGGGAAGACCCGGATGTGATCCTTGTGGGCGAATTACGCGACCTGGAAACCATTCGCCTGG
CGCTGACGGCCGCTGAGACCGGCCACCTGGTCTTTGGCACCCTGCACACCACCTCGGCGGCAAAGACCGTGGACAGGCTG
GTGGACGTGTTCCCGGCGGGGGAAAAGGCCATGGTCCGCACCATGCTGTCTGAGTCGCTGCAAGCGGTGGTGTCACAGGT
GTTGGTCAAGAAGCTCGGCGGTGGGCGGGTGGCCGCCCATGAAATCATGTTGGGCACGCCAGCCATCCGTAACTTGATCC
GCGAAGACAAGGTGGCGCAGATGGTCTCGGCGATTCAGACCGGTGCAGCGTTGGGGATGAAAACCTTGGATATGAGTTTG
AAGGCGTTGGTCACGGAAGGCGTGATCAGTCGGGAAGAGGCGCGGGAGAAGGCGAGGGTACCTGGGGATATCTGA
ATGGATATCACTGAATTACTGGCGCACAGCGTACGCCAGGGCGCCTCCGACCTGCATCTGTCGGCTGGCCTGGCGCCGAT
GCTGCGGGTGGACGGTGAGGTATGGCCGTTGGATTGGCCGGTACTGGCACCTGCCCAAGTGGCTAACTTATTGAGCCCTT
TGCTCAACCAATACCAACAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAACTGCCCGGTGTGGCGCGG
TTCCGGGTCAATGTATTTCAGCAGGCGCGCGGTATGGGGGCGGTGTTTCGCACGCTTGCAGCCGAGGTCCAGAGCTTGGA
AGCCCTTGGCCTGGGGGAGGTGTTCCAGCGTATTGCCCAGTTGCCGCGCGGCCTGGTACTGGTGACCGGGCCCACCGGCT
CCGGCAAGTCCACCACCCTGGCGGCGATGATCGACTACCTCAATCAGCATCGGCGCCAGCACATCCTCACCCTCGAAGAC
CCTGTCGAGTTTATCCACACGCCGAAAATGGCCCTGATCAACCAGCGTCAGGTCCACCGCGACACCCACAGTTTTTCCAC
CGCCCTGCGTTCGGCCCTGCGGGAAGACCCGGATGTGATCCTTGTGGGCGAATTACGCGACCTGGAAACCATTCGCCTGG
CGCTGACGGCCGCTGAGACCGGCCACCTGGTCTTTGGCACCCTGCACACCACCTCGGCGGCAAAGACCGTGGACAGGCTG
GTGGACGTGTTCCCGGCGGGGGAAAAGGCCATGGTCCGCACCATGCTGTCTGAGTCGCTGCAAGCGGTGGTGTCACAGGT
GTTGGTCAAGAAGCTCGGCGGTGGGCGGGTGGCCGCCCATGAAATCATGTTGGGCACGCCAGCCATCCGTAACTTGATCC
GCGAAGACAAGGTGGCGCAGATGGTCTCGGCGATTCAGACCGGTGCAGCGTTGGGGATGAAAACCTTGGATATGAGTTTG
AAGGCGTTGGTCACGGAAGGCGTGATCAGTCGGGAAGAGGCGCGGGAGAAGGCGAGGGTACCTGGGGATATCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.