Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX/comX2/sigX2 | Type | Regulator |
| Locus tag | VOI49_RS01985 | Genome accession | NZ_CP142018 |
| Coordinates | 368408..368890 (+) | Length | 160 a.a. |
| NCBI ID | WP_003049584.1 | Uniprot ID | A0A380JYT5 |
| Organism | Streptococcus dysgalactiae strain lu24 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| IS/Tn | 369341..369508 | 368408..368890 | flank | 451 |
Gene organization within MGE regions
Location: 368408..369508
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| VOI49_RS01985 | comX/sigX/comX2/sigX2 | 368408..368890 (+) | 483 | WP_003049584.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 19124.95 Da Isoelectric Point: 9.0893
>NTDB_id=921007 VOI49_RS01985 WP_003049584.1 368408..368890(+) (comX/sigX/comX2/sigX2) [Streptococcus dysgalactiae strain lu24]
MSLETREVFEKVKPIILKLKRHYYLQLWETDDWLQEGHLVLVRLLERHPELVGDEARLYRYFKTKFSSYLKDVLRRQESQ
KRQFDKMAYEEIGDVAHAIPAGGLWLDDYVAYREVLVQVEEALSEADRKQFQALVRGERFKGRQALLRKVRPYFSGFDQG
MSLETREVFEKVKPIILKLKRHYYLQLWETDDWLQEGHLVLVRLLERHPELVGDEARLYRYFKTKFSSYLKDVLRRQESQ
KRQFDKMAYEEIGDVAHAIPAGGLWLDDYVAYREVLVQVEEALSEADRKQFQALVRGERFKGRQALLRKVRPYFSGFDQG
Nucleotide
Download Length: 483 bp
>NTDB_id=921007 VOI49_RS01985 WP_003049584.1 368408..368890(+) (comX/sigX/comX2/sigX2) [Streptococcus dysgalactiae strain lu24]
ATGTCGTTAGAGACAAGGGAGGTTTTTGAGAAGGTCAAACCTATTATTTTAAAGCTGAAGCGTCATTATTACCTACAGTT
GTGGGAGACGGATGACTGGTTACAAGAGGGGCATTTGGTTTTAGTGAGGTTGTTGGAACGTCACCCAGAATTAGTAGGAG
ATGAGGCTCGCTTGTATCGGTATTTTAAAACCAAGTTTTCGTCGTATTTGAAAGATGTCTTGCGTCGGCAAGAAAGTCAG
AAACGCCAGTTTGATAAGATGGCTTATGAGGAGATAGGGGATGTGGCGCATGCGATTCCAGCTGGTGGGTTATGGTTGGA
TGATTATGTGGCTTATCGGGAGGTTTTGGTTCAGGTGGAGGAGGCCTTAAGTGAAGCGGATCGGAAGCAGTTTCAGGCTT
TGGTGAGAGGGGAACGGTTTAAGGGGCGTCAGGCTTTACTTAGGAAGGTTCGTCCTTACTTTAGTGGGTTTGACCAAGGG
TGA
ATGTCGTTAGAGACAAGGGAGGTTTTTGAGAAGGTCAAACCTATTATTTTAAAGCTGAAGCGTCATTATTACCTACAGTT
GTGGGAGACGGATGACTGGTTACAAGAGGGGCATTTGGTTTTAGTGAGGTTGTTGGAACGTCACCCAGAATTAGTAGGAG
ATGAGGCTCGCTTGTATCGGTATTTTAAAACCAAGTTTTCGTCGTATTTGAAAGATGTCTTGCGTCGGCAAGAAAGTCAG
AAACGCCAGTTTGATAAGATGGCTTATGAGGAGATAGGGGATGTGGCGCATGCGATTCCAGCTGGTGGGTTATGGTTGGA
TGATTATGTGGCTTATCGGGAGGTTTTGGTTCAGGTGGAGGAGGCCTTAAGTGAAGCGGATCGGAAGCAGTTTCAGGCTT
TGGTGAGAGGGGAACGGTTTAAGGGGCGTCAGGCTTTACTTAGGAAGGTTCGTCCTTACTTTAGTGGGTTTGACCAAGGG
TGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.