Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | RMP66_RS00080 | Genome accession | NZ_CP135094 |
| Coordinates | 15964..16434 (+) | Length | 156 a.a. |
| NCBI ID | WP_002936602.1 | Uniprot ID | A0A075SE61 |
| Organism | Streptococcus suis strain 1547095 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 13656..56173 | 15964..16434 | within | 0 |
Gene organization within MGE regions
Location: 13656..56173
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RMP66_RS00075 (RMP66_00075) | ftsH | 13656..15626 (+) | 1971 | WP_024394590.1 | ATP-dependent zinc metalloprotease FtsH | - |
| RMP66_RS00080 (RMP66_00080) | comX/sigX | 15964..16434 (+) | 471 | WP_002936602.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| RMP66_RS00185 (RMP66_00185) | mreC | 23715..24551 (+) | 837 | WP_024394836.1 | rod shape-determining protein MreC | - |
| RMP66_RS00190 (RMP66_00190) | mreD | 24553..25056 (+) | 504 | WP_228475524.1 | rod shape-determining protein MreD | - |
| RMP66_RS00195 (RMP66_00195) | pcsB | 25141..26397 (+) | 1257 | WP_024394838.1 | peptidoglycan hydrolase PcsB | - |
| RMP66_RS00200 (RMP66_00200) | - | 26500..27468 (+) | 969 | WP_002935337.1 | ribose-phosphate diphosphokinase | - |
| RMP66_RS00205 (RMP66_00205) | - | 27555..28733 (+) | 1179 | WP_024394839.1 | pyridoxal phosphate-dependent aminotransferase | - |
| RMP66_RS00210 (RMP66_00210) | recO | 28720..29502 (+) | 783 | WP_024394840.1 | DNA repair protein RecO | - |
| RMP66_RS00215 (RMP66_00215) | plsX | 29499..30506 (+) | 1008 | WP_014637253.1 | phosphate acyltransferase PlsX | - |
| RMP66_RS00220 (RMP66_00220) | - | 30499..30747 (+) | 249 | WP_014637254.1 | phosphopantetheine-binding protein | - |
| RMP66_RS00225 (RMP66_00225) | purC | 30865..31572 (+) | 708 | WP_024394841.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| RMP66_RS00230 (RMP66_00230) | - | 31585..35304 (+) | 3720 | WP_044675272.1 | phosphoribosylformylglycinamidine synthase | - |
| RMP66_RS00235 (RMP66_00235) | purF | 35307..36761 (+) | 1455 | WP_024394843.1 | amidophosphoribosyltransferase | - |
| RMP66_RS00240 (RMP66_00240) | purM | 36817..37839 (+) | 1023 | WP_024394844.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| RMP66_RS00245 (RMP66_00245) | purN | 37836..38387 (+) | 552 | WP_024386485.1 | phosphoribosylglycinamide formyltransferase | - |
| RMP66_RS00250 (RMP66_00250) | purH | 38397..39944 (+) | 1548 | WP_024394845.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| RMP66_RS00255 (RMP66_00255) | - | 40009..40839 (+) | 831 | WP_002935322.1 | DNA adenine methylase | - |
| RMP66_RS00260 (RMP66_00260) | - | 40829..41644 (+) | 816 | WP_032499218.1 | site-specific DNA-methyltransferase | - |
| RMP66_RS00265 (RMP66_00265) | - | 41622..42368 (+) | 747 | WP_313910486.1 | DpnII family type II restriction endonuclease | - |
| RMP66_RS00270 (RMP66_00270) | - | 42343..42552 (+) | 210 | WP_313910487.1 | DpnII family type II restriction endonuclease | - |
| RMP66_RS00275 (RMP66_00275) | - | 42552..43457 (+) | 906 | WP_002935319.1 | type II restriction endonuclease | - |
| RMP66_RS00280 (RMP66_00280) | purD | 43578..44840 (+) | 1263 | WP_002935318.1 | phosphoribosylamine--glycine ligase | - |
| RMP66_RS00285 (RMP66_00285) | purE | 44866..45354 (+) | 489 | WP_002935317.1 | 5-(carboxyamino)imidazole ribonucleotide mutase | - |
| RMP66_RS00290 (RMP66_00290) | purK | 45341..46426 (+) | 1086 | WP_002935314.1 | 5-(carboxyamino)imidazole ribonucleotide synthase | - |
| RMP66_RS00295 (RMP66_00295) | - | 46413..47336 (+) | 924 | WP_002935313.1 | DUF4268 domain-containing protein | - |
| RMP66_RS00300 (RMP66_00300) | purB | 47371..48663 (+) | 1293 | WP_013730055.1 | adenylosuccinate lyase | - |
| RMP66_RS00305 (RMP66_00305) | - | 49172..49996 (+) | 825 | WP_002935311.1 | ABC transporter ATP-binding protein | - |
| RMP66_RS00310 (RMP66_00310) | - | 49989..50723 (+) | 735 | WP_002935310.1 | ABC transporter permease | - |
| RMP66_RS00315 (RMP66_00315) | - | 51058..51786 (+) | 729 | WP_002935309.1 | DUF2705 family protein | - |
| RMP66_RS00320 (RMP66_00320) | - | 51796..52374 (+) | 579 | WP_002935308.1 | CPBP family intramembrane glutamic endopeptidase | - |
| RMP66_RS00325 (RMP66_00325) | - | 52389..52817 (+) | 429 | WP_002935307.1 | Msa family membrane protein | - |
| RMP66_RS00330 (RMP66_00330) | - | 52810..53682 (+) | 873 | WP_002935305.1 | ABC transporter ATP-binding protein | - |
| RMP66_RS00335 (RMP66_00335) | - | 53688..54458 (+) | 771 | WP_002935304.1 | membrane protein | - |
| RMP66_RS00340 (RMP66_00340) | - | 54461..56173 (+) | 1713 | WP_002935303.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 19072.97 Da Isoelectric Point: 8.9339
>NTDB_id=885061 RMP66_RS00080 WP_002936602.1 15964..16434(+) (comX/sigX) [Streptococcus suis strain 1547095]
MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLEAQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKR
KFDRMPHEDIHELSHAIQSPGLINDELLMLRGALRDYRKNLSNDQLDKYEKLISGQCFNGRREMIRDLQIHLKDFR
MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLEAQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKR
KFDRMPHEDIHELSHAIQSPGLINDELLMLRGALRDYRKNLSNDQLDKYEKLISGQCFNGRREMIRDLQIHLKDFR
Nucleotide
Download Length: 471 bp
>NTDB_id=885061 RMP66_RS00080 WP_002936602.1 15964..16434(+) (comX/sigX) [Streptococcus suis strain 1547095]
ATGGAATTCGAAAAAGTGTACGCAAGCGTCAAAGGTATTGTAAATAAGGCTCGAAAAGAGTTTTACATTAAACTATGGGA
TCGAGATGATTGGGAACAAGAAGGAATGATGACCTTGTTTGAATTATTAGAAGCTCAACCGTGGCTAGTTGATGAACAAG
TTCAATTATATTGTTATTTTAAAGTTAAGTTCAGAAATCGAATCAAGGATCGTATCCGCAAACAGGAAAGTCAAAAACGC
AAGTTTGACCGTATGCCACATGAAGATATTCACGAATTATCTCACGCAATACAATCACCGGGATTAATAAACGATGAACT
ATTAATGCTAAGAGGTGCCTTGAGAGATTATCGAAAAAATCTGAGTAATGATCAACTTGATAAATACGAAAAATTAATTA
GCGGACAATGTTTTAATGGTCGCCGTGAAATGATACGTGATTTACAAATTCATTTGAAAGACTTTCGCTAA
ATGGAATTCGAAAAAGTGTACGCAAGCGTCAAAGGTATTGTAAATAAGGCTCGAAAAGAGTTTTACATTAAACTATGGGA
TCGAGATGATTGGGAACAAGAAGGAATGATGACCTTGTTTGAATTATTAGAAGCTCAACCGTGGCTAGTTGATGAACAAG
TTCAATTATATTGTTATTTTAAAGTTAAGTTCAGAAATCGAATCAAGGATCGTATCCGCAAACAGGAAAGTCAAAAACGC
AAGTTTGACCGTATGCCACATGAAGATATTCACGAATTATCTCACGCAATACAATCACCGGGATTAATAAACGATGAACT
ATTAATGCTAAGAGGTGCCTTGAGAGATTATCGAAAAAATCTGAGTAATGATCAACTTGATAAATACGAAAAATTAATTA
GCGGACAATGTTTTAATGGTCGCCGTGAAATGATACGTGATTTACAAATTCATTTGAAAGACTTTCGCTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.