Detailed information NTG0087506

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: STNY_RS17060
• Genome accession: NZ_AP024684
• Coordinates: 3675563..3675991 (-)
• Length: 142 a.a.
• NCBI ID: WP_130767794.1
• Uniprot ID: -
• Organism: Stenotrophomonas pavanii strain Y
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3670563..3680991

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
STNY_RS17050 (STNY_R33870)	-	3671864..3674896 (-)	3033	WP_130767796.1	fused MFS/spermidine synthase	-
STNY_RS17055 (STNY_R33880)	-	3675012..3675419 (-)	408	WP_338061741.1	pilin	-
STNY_RS17060 (STNY_R33890)	pilE	3675563..3675991 (-)	429	WP_130767794.1	pilin	Machinery gene
STNY_RS17065 (STNY_R33900)	pilC	3676343..3677602 (+)	1260	WP_130767793.1	type II secretion system F family protein	Machinery gene
STNY_RS17070 (STNY_R33910)	-	3677611..3678474 (+)	864	WP_049416956.1	A24 family peptidase	-
STNY_RS17075 (STNY_R33920)	coaE	3678486..3679097 (+)	612	WP_130767792.1	dephospho-CoA kinase	-
STNY_RS17080 (STNY_R33930)	-	3679156..3679542 (-)	387	WP_049442671.1	hypothetical protein	-

Sequence

Protein

• Length: 142 a.a.
• Molecular weight: 14573.67 Da
• Isoelectric Point: 8.9860

>NTDB_id=87506 STNY_RS17060 WP_130767794.1 3675563..3675991(-) (pilE) [Stenotrophomonas pavanii strain Y]
MKNQKGFTLIELMIVVAIIAILAAIALPAYQDYLIRSQVSEGLTLTSGAKSAVAETYSNTGAFPADNAAAGLEAKANIKG
KYVTGVEVKNNVITATFGNDANSKIAGGSLTLTGTDNNGSISWACAGDGTKVAAKYLPKACR

Nucleotide

• Length: 429 bp

>NTDB_id=87506 STNY_RS17060 WP_130767794.1 3675563..3675991(-) (pilE) [Stenotrophomonas pavanii strain Y]
ATGAAGAACCAGAAGGGCTTCACCCTTATCGAACTGATGATCGTCGTTGCGATCATCGCCATCCTGGCCGCCATCGCCCT
GCCGGCTTACCAGGACTACCTGATCCGTTCGCAGGTGTCCGAAGGTCTGACCCTGACCTCCGGTGCCAAGTCTGCAGTAG
CCGAGACCTACTCCAACACCGGCGCATTCCCGGCGGACAATGCCGCTGCTGGTCTGGAGGCCAAGGCCAACATCAAGGGC
AAGTATGTGACCGGCGTTGAAGTCAAGAACAACGTCATCACCGCTACCTTCGGTAACGACGCTAACTCCAAGATTGCGGG
CGGTTCGCTGACCCTGACCGGCACCGACAACAATGGCTCCATCTCGTGGGCTTGCGCCGGCGATGGCACCAAGGTTGCTG
CAAAGTACCTGCCGAAGGCTTGCCGCTGA

Domains

Predicted by InterproScan.

• Pilin (bacterial filament) (Pilin) (36-142)

• Prokaryotic N-terminal methylation motif (N_methyl) (1-27)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Neisseria gonorrhoeae MS11	50.968	100	0.556
pilE	Neisseria gonorrhoeae strain FA1090	48.052	100	0.521
pilA2	Legionella pneumophila strain ERS1305867	51.408	100	0.514
pilA2	Legionella pneumophila str. Paris	51.408	100	0.514
pilE	Neisseria elongata subsp. glycolytica ATCC 29315	37.5	100	0.486
pilA/pilA1	Eikenella corrodens VA1	42.484	100	0.458
pilA	Ralstonia pseudosolanacearum GMI1000	39.024	100	0.451
comP	Acinetobacter baylyi ADP1	41.722	100	0.444
pilA	Pseudomonas aeruginosa PAK	39.869	100	0.43
pilA	Acinetobacter baumannii strain A118	40	100	0.408
pilA/pilAI	Pseudomonas stutzeri DSM 10701	39.437	100	0.394
pilA	Vibrio parahaemolyticus RIMD 2210633	42.4	88.028	0.373
pilA	Vibrio campbellii strain DS40M4	35.57	100	0.373
pilA/pilAII	Pseudomonas stutzeri DSM 10701	36.879	99.296	0.366
pilA	Vibrio cholerae C6706	35.616	100	0.366
pilA	Vibrio cholerae strain A1552	35.616	100	0.366
pilA	Vibrio cholerae O1 biovar El Tor strain E7946	35.616	100	0.366