Detailed information NTG0082990

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: R8611_RS10640
• Genome accession: NZ_AP026927
• Coordinates: 2072147..2073244 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266667.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PZ900700178
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2067147..2078244

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R8611_RS10615 (PC0174_20580)	pgsA	2067668..2068213 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
R8611_RS10620 (PC0174_20590)	rodZ	2068224..2069045 (-)	822	WP_001227958.1	cytoskeleton protein RodZ	-
R8611_RS10625 (PC0174_20600)	yfmH	2069087..2070370 (-)	1284	WP_000170216.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
R8611_RS10630 (PC0174_20610)	yfmF	2070367..2071617 (-)	1251	WP_000424268.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
R8611_RS10635 (PC0174_20620)	yaaA	2071776..2072144 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
R8611_RS10640 (PC0174_20630)	recF	2072147..2073244 (+)	1098	WP_000266667.1	DNA replication/repair protein RecF	Machinery gene
R8611_RS10645 (PC0174_20640)	guaB	2073295..2074773 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
R8611_RS10650 (PC0174_20650)	trpS	2074925..2075950 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
R8611_RS10655 (PC0174_20660)	-	2076156..2077778 (+)	1623	WP_000958770.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41944.01 Da
• Isoelectric Point: 8.6746

>NTDB_id=82990 R8611_RS10640 WP_000266667.1 2072147..2073244(+) (recF) [Streptococcus pneumoniae strain PZ900700178]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKAAVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=82990 R8611_RS10640 WP_000266667.1 2072147..2073244(+) (recF) [Streptococcus pneumoniae strain PZ900700178]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAAGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTGCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.452	100	0.995
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46