Detailed information    

insolico Bioinformatically predicted

Overview


Name   comX/comX2   Type   Regulator
Locus tag   M9H69_RS01315 Genome accession   NZ_CP097843
Coordinates   236076..236549 (+) Length   157 a.a.
NCBI ID   WP_001049389.1    Uniprot ID   A0A1X1GE71
Organism   Streptococcus oralis strain HP01     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 231076..241549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M9H69_RS01290 (M9H69_01290) - 231819..232694 (-) 876 WP_080566840.1 RluA family pseudouridine synthase -
  M9H69_RS01295 (M9H69_01295) pbp2a 232781..234976 (+) 2196 WP_084912008.1 penicillin-binding protein PBP2A -
  M9H69_RS01300 (M9H69_01300) rpmG 235029..235181 (+) 153 WP_009755504.1 50S ribosomal protein L33 -
  M9H69_RS01305 (M9H69_01305) secE 235191..235367 (+) 177 WP_000505776.1 preprotein translocase subunit SecE -
  M9H69_RS01310 (M9H69_01310) nusG 235419..235955 (+) 537 WP_000376728.1 transcription termination/antitermination protein NusG -
  M9H69_RS01315 (M9H69_01315) comX/comX2 236076..236549 (+) 474 WP_001049389.1 hypothetical protein Regulator

Sequence


Protein


Download         Length: 157 a.a.        Molecular weight: 19254.06 Da        Isoelectric Point: 7.8681

>NTDB_id=692906 M9H69_RS01315 WP_001049389.1 236076..236549(+) (comX/comX2) [Streptococcus oralis strain HP01]
MNLKELYEETKGIVHKCRKDYHLHLWEKEDWDQEGMMCLYELVSSHPELLEGERHRLYVCFKTKFRNRILDNIRKQESHK
RRFNKEPYEEVSEISHRLGEKGLRLDDYYLFHELLKTYKSKQSEEKQELVDRLMGGEVFRGRKALLRELSLIFSEFR

Nucleotide


Download         Length: 474 bp        

>NTDB_id=692906 M9H69_RS01315 WP_001049389.1 236076..236549(+) (comX/comX2) [Streptococcus oralis strain HP01]
ATGAATCTGAAAGAACTATACGAAGAAACGAAGGGGATTGTCCATAAGTGTCGCAAAGATTATCATCTACATCTGTGGGA
GAAAGAGGACTGGGACCAGGAGGGCATGATGTGCCTCTATGAACTGGTCAGTAGCCATCCAGAGTTGCTAGAGGGTGAGC
GCCATCGACTATATGTCTGCTTTAAAACAAAATTTAGAAATCGCATCCTGGATAATATTCGAAAACAGGAAAGCCATAAG
CGCCGTTTCAACAAAGAACCCTATGAAGAGGTGAGTGAGATTAGCCATCGCCTAGGAGAAAAAGGACTCAGACTGGATGA
TTATTATCTCTTTCACGAACTTCTAAAGACTTACAAATCCAAGCAAAGTGAGGAGAAACAAGAGTTAGTGGACCGTCTCA
TGGGAGGGGAAGTCTTCAGAGGACGTAAAGCTCTTCTAAGAGAACTTTCCCTTATTTTTTCAGAATTTCGGTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1X1GE71

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comX/sigX/comX2/sigX2 Streptococcus mitis SK321

63.636

98.089

0.624

  comX/sigX/comX1/sigX1 Streptococcus mitis SK321

62.987

98.089

0.618

  comX/comX1 Streptococcus pneumoniae D39

62.987

98.089

0.618

  comX/comX2 Streptococcus pneumoniae R6

62.987

98.089

0.618

  comX/comX1 Streptococcus pneumoniae R6

62.987

98.089

0.618

  comX/sigX/comX2/sigX2 Streptococcus mitis NCTC 12261

62.987

98.089

0.618

  comX/comX2 Streptococcus pneumoniae Rx1

62.987

98.089

0.618

  comX/comX2 Streptococcus pneumoniae D39

62.987

98.089

0.618

  comX/comX1 Streptococcus pneumoniae Rx1

62.987

98.089

0.618

  comX/comX2 Streptococcus pneumoniae TIGR4

62.338

98.089

0.611

  comX/comX1 Streptococcus pneumoniae TIGR4

62.338

98.089

0.611

  comX/sigX/comX1/sigX1 Streptococcus mitis NCTC 12261

62.338

98.089

0.611

  comR/comR2 Streptococcus gordonii str. Challis substr. CH1

53.205

99.363

0.529

  comR/comR1 Streptococcus gordonii str. Challis substr. CH1

53.205

99.363

0.529

  comX/sigX Streptococcus mutans UA159

47.368

96.815

0.459

  comX/sigX Streptococcus suis D9

40.764

100

0.408

  comX/sigX Streptococcus suis isolate S10

40.764

100

0.408

  comX/sigX Streptococcus suis P1/7

40.764

100

0.408

  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS315

39.744

99.363

0.395

  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS315

39.744

99.363

0.395

  comX/sigX/comX1/sigX1 Streptococcus pyogenes JRS4

41.333

95.541

0.395

  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS8232

41.333

95.541

0.395

  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS8232

41.333

95.541

0.395

  comX Streptococcus thermophilus LMG 18311

41.333

95.541

0.395

  comX Streptococcus thermophilus LMD-9

41.333

95.541

0.395

  comX/sigX Streptococcus salivarius strain HSISS4

41.333

95.541

0.395

  comX/sigX/comX2/sigX2 Streptococcus pyogenes JRS4

41.333

95.541

0.395

  comX Streptococcus salivarius SK126

41.333

95.541

0.395

  comX/sigX Streptococcus infantarius subsp. infantarius ATCC BAA-102

38.608

100

0.389

  comX Streptococcus sobrinus strain NIDR 6715-7

41.259

91.083

0.376