Detailed information NTG0066542

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: SCSC_RS01420
• Genome accession: NZ_AP014647
• Coordinates: 274484..274966 (+)
• Length: 160 a.a.
• NCBI ID: WP_037598771.1
• Uniprot ID: -
• Organism: Streptococcus constellatus subsp. constellatus strain CCUG 24889
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 269484..279966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCSC_RS01395 (SCSC_0287)	-	270767..271523 (-)	757	Protein_254	hypothetical protein	-
SCSC_RS01400 (SCSC_0288)	-	271671..272732 (+)	1062	WP_006270623.1	Xaa-Pro peptidase family protein	-
SCSC_RS01405 (SCSC_0289)	efp	272791..273351 (+)	561	WP_003026309.1	elongation factor P	-
SCSC_RS01410 (SCSC_0290)	-	273461..273850 (+)	390	WP_003074522.1	Asp23/Gls24 family envelope stress response protein	-
SCSC_RS01415 (SCSC_0291)	nusB	273843..274268 (+)	426	WP_006270622.1	transcription antitermination factor NusB	-
SCSC_RS01420 (SCSC_0292)	comR/comR2	274484..274966 (+)	483	WP_037598771.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 19753.61 Da
• Isoelectric Point: 8.6079

>NTDB_id=66542 SCSC_RS01420 WP_037598771.1 274484..274966(+) (comR/comR2) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MDFKELYDKVRGIVLKCRREYYVHLWELSDWDQEGMLVLYELVSRYPQLVESESRLYVYYKTKFRNHIKDILRKQESQKR
KLDRQAYEEVSEIGHKLSLKELYLDELVILRAQLKSYQKQLSPEKQEQYERLLADERFQGRQAMLRELRAYLQDYDERKS

Nucleotide

• Length: 483 bp

>NTDB_id=66542 SCSC_RS01420 WP_037598771.1 274484..274966(+) (comR/comR2) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGGACTTCAAGGAGTTGTATGACAAGGTGAGAGGGATCGTACTGAAGTGTCGCCGGGAATATTATGTCCACCTGTGGGA
GTTAAGTGATTGGGACCAAGAAGGGATGCTGGTCTTATATGAGTTGGTGAGTCGCTATCCGCAACTGGTAGAGTCAGAAA
GTCGTCTCTATGTTTACTATAAGACCAAGTTCCGTAATCACATCAAGGACATCCTGCGCAAACAAGAAAGCCAAAAGCGC
AAACTAGACCGTCAAGCTTATGAGGAAGTGAGCGAGATAGGTCACAAGCTCAGCCTGAAAGAACTCTATTTGGATGAATT
GGTGATTCTCCGAGCCCAACTAAAGAGCTATCAAAAGCAGCTAAGTCCAGAGAAACAAGAACAGTATGAGCGCTTACTAG
CAGATGAACGGTTTCAAGGACGCCAAGCGATGCTTCGGGAGTTACGGGCCTACTTACAAGATTACGATGAAAGAAAAAGC
TAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	61.392	98.75	0.606
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	61.392	98.75	0.606
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	56.41	97.5	0.55
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	55.769	97.5	0.544
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	55.128	97.5	0.537
comX/comX1	Streptococcus pneumoniae R6	55.556	95.625	0.531
comX/comX1	Streptococcus pneumoniae D39	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae Rx1	55.556	95.625	0.531
comX/comX1	Streptococcus pneumoniae Rx1	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae D39	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae R6	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae TIGR4	54.487	97.5	0.531
comX/comX1	Streptococcus pneumoniae TIGR4	54.487	97.5	0.531
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	54.487	97.5	0.531
comX/sigX	Streptococcus mutans UA159	49.682	98.125	0.488
comX/sigX	Streptococcus suis D9	46.452	96.875	0.45
comX/sigX	Streptococcus suis isolate S10	46.452	96.875	0.45
comX/sigX	Streptococcus suis P1/7	46.452	96.875	0.45
comX	Streptococcus salivarius SK126	43.506	96.25	0.419
comX/sigX	Streptococcus salivarius strain HSISS4	42.857	96.25	0.412
comX	Streptococcus thermophilus LMG 18311	42.857	96.25	0.412
comX	Streptococcus thermophilus LMD-9	42.857	96.25	0.412
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	41.401	98.125	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	41.401	98.125	0.406
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	41.401	98.125	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	41.401	98.125	0.406
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	41.401	98.125	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	41.401	98.125	0.406
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	39.103	97.5	0.381
comX	Streptococcus sobrinus strain NIDR 6715-7	37.419	96.875	0.362