Detailed information NTG0066536

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: SCSC_RS00080
• Genome accession: NZ_AP014647
• Coordinates: 15960..16442 (+)
• Length: 160 a.a.
• NCBI ID: WP_037598771.1
• Uniprot ID: -
• Organism: Streptococcus constellatus subsp. constellatus strain CCUG 24889
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 10960..21442

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCSC_RS00055 (SCSC_0013)	tilS	11155..12432 (+)	1278	WP_006270329.1	tRNA lysidine(34) synthetase TilS	-
SCSC_RS00060 (SCSC_0014)	hpt	12438..12980 (+)	543	WP_006270323.1	hypoxanthine phosphoribosyltransferase	-
SCSC_RS00065 (SCSC_0015)	ftsH	13001..14971 (+)	1971	WP_003071681.1	ATP-dependent zinc metalloprotease FtsH	-
SCSC_RS00070	-	15196..15364 (+)	169	Protein_14	transposase	-
SCSC_RS00075	rplQ	15361..15528 (+)	168	Protein_15	50S ribosomal protein L17	-
SCSC_RS00080 (SCSC_0016)	comR/comR2	15960..16442 (+)	483	WP_037598771.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 19753.61 Da
• Isoelectric Point: 8.6079

>NTDB_id=66536 SCSC_RS00080 WP_037598771.1 15960..16442(+) (comR/comR2) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MDFKELYDKVRGIVLKCRREYYVHLWELSDWDQEGMLVLYELVSRYPQLVESESRLYVYYKTKFRNHIKDILRKQESQKR
KLDRQAYEEVSEIGHKLSLKELYLDELVILRAQLKSYQKQLSPEKQEQYERLLADERFQGRQAMLRELRAYLQDYDERKS

Nucleotide

• Length: 483 bp

>NTDB_id=66536 SCSC_RS00080 WP_037598771.1 15960..16442(+) (comR/comR2) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGGACTTCAAGGAGTTGTATGACAAAGTGAGAGGGATCGTACTGAAGTGTCGCCGGGAATATTATGTCCACCTGTGGGA
GTTAAGTGATTGGGACCAAGAAGGGATGCTGGTCTTATATGAGTTGGTGAGTCGCTATCCGCAACTGGTAGAGTCAGAAA
GTCGTCTCTATGTTTACTATAAGACCAAGTTCCGTAATCACATCAAGGACATCCTGCGCAAACAAGAAAGCCAAAAGCGC
AAACTAGACCGTCAAGCTTATGAGGAAGTGAGCGAGATAGGTCACAAGCTCAGCCTGAAAGAACTCTATTTGGATGAATT
GGTGATTCTCCGAGCCCAACTAAAGAGCTATCAAAAGCAGCTAAGTCCAGAGAAACAAGAACAGTATGAGCGCTTACTAG
CAGATGAACGGTTTCAAGGACGCCAAGCGATGCTTCGGGAGTTACGGGCCTACTTACAAGATTACGATGAAAGAAAAAGC
TAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	61.392	98.75	0.606
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	61.392	98.75	0.606
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	56.41	97.5	0.55
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	55.769	97.5	0.544
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	55.128	97.5	0.537
comX/comX1	Streptococcus pneumoniae R6	55.556	95.625	0.531
comX/comX1	Streptococcus pneumoniae D39	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae Rx1	55.556	95.625	0.531
comX/comX1	Streptococcus pneumoniae Rx1	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae D39	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae R6	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae TIGR4	54.487	97.5	0.531
comX/comX1	Streptococcus pneumoniae TIGR4	54.487	97.5	0.531
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	54.487	97.5	0.531
comX/sigX	Streptococcus mutans UA159	49.682	98.125	0.488
comX/sigX	Streptococcus suis D9	46.452	96.875	0.45
comX/sigX	Streptococcus suis isolate S10	46.452	96.875	0.45
comX/sigX	Streptococcus suis P1/7	46.452	96.875	0.45
comX	Streptococcus salivarius SK126	43.506	96.25	0.419
comX/sigX	Streptococcus salivarius strain HSISS4	42.857	96.25	0.412
comX	Streptococcus thermophilus LMG 18311	42.857	96.25	0.412
comX	Streptococcus thermophilus LMD-9	42.857	96.25	0.412
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	41.401	98.125	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	41.401	98.125	0.406
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	41.401	98.125	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	41.401	98.125	0.406
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	41.401	98.125	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	41.401	98.125	0.406
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	39.103	97.5	0.381
comX	Streptococcus sobrinus strain NIDR 6715-7	37.419	96.875	0.362