Detailed information    

insolico Bioinformatically predicted

Overview

Name   comR/comR2   Type   Regulator
Locus tag   ANG_RS02465 Genome accession   NZ_AP013072
Coordinates   467647..468120 (+) Length   157 a.a.
NCBI ID   WP_020999816.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 462647..473120
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS02440 (ANG_0479) - 463918..464673 (-) 756 WP_020999818.1 hypothetical protein -
  ANG_RS02445 (ANG_0480) - 464832..465893 (+) 1062 WP_025271618.1 M24 family metallopeptidase -
  ANG_RS02450 (ANG_0481) efp 465952..466512 (+) 561 WP_003037772.1 elongation factor P -
  ANG_RS02455 (ANG_0482) - 466623..467012 (+) 390 WP_003037725.1 Asp23/Gls24 family envelope stress response protein -
  ANG_RS02460 (ANG_0483) nusB 467005..467430 (+) 426 WP_003037723.1 transcription antitermination factor NusB -
  ANG_RS02465 (ANG_0484) comR/comR2 467647..468120 (+) 474 WP_020999816.1 sigma-70 family RNA polymerase sigma factor Regulator
  ANG_RS02470 - 468313..469030 (+) 718 Protein_470 HAD family hydrolase -
  ANG_RS11325 - 469115..469363 (+) 249 WP_231847296.1 LacI family DNA-binding transcriptional regulator -
  ANG_RS11330 (ANG_0487) - 469327..469557 (+) 231 WP_231847299.1 hypothetical protein -
  ANG_RS11335 (ANG_0488) - 469558..469986 (+) 429 WP_231847301.1 hypothetical protein -
  ANG_RS02480 (ANG_0489) - 470294..470890 (+) 597 WP_003037776.1 TetR/AcrR family transcriptional regulator -
  ANG_RS02485 (ANG_0490) - 470887..471453 (+) 567 WP_025271619.1 NAD(P)H-dependent oxidoreductase -
  ANG_RS11605 - 471590..471957 (+) 368 Protein_476 EXLDI protein -
  ANG_RS02495 (ANG_0492) - 472141..473076 (+) 936 WP_020999450.1 IS30 family transposase -

Sequence

Protein


Download         Length: 157 a.a.        Molecular weight: 19278.12 Da        Isoelectric Point: 6.8671

>NTDB_id=65505 ANG_RS02465 WP_020999816.1 467647..468120(+) (comR/comR2) [Streptococcus anginosus subsp. whileyi MAS624]
MEFKELYGKVRGIVLKCRREYYVHLWELSDWEQEGMLVLYQLVSRYPQLVEEDHQLYVYYKTKFRNHILDILRKQESQKR
KLDRQAYEEVSEIGHKLSLKELYLDELVILRDQLKSYQAQLSPEKQEQYECLLADERFKGRQAMIRELRAYLKDYSD

Nucleotide


Download         Length: 474 bp        

>NTDB_id=65505 ANG_RS02465 WP_020999816.1 467647..468120(+) (comR/comR2) [Streptococcus anginosus subsp. whileyi MAS624]
ATGGAGTTCAAGGAGTTATATGGCAAGGTAAGAGGAATTGTGCTGAAGTGTCGGAGGGAATATTATGTCCACCTGTGGGA
ATTAAGCGATTGGGAACAAGAGGGGATGTTGGTGCTCTATCAGTTGGTGAGTCGCTATCCGCAGCTAGTAGAAGAAGATC
ATCAGCTCTATGTTTACTATAAGACCAAGTTCCGCAATCATATCCTAGACATCCTCCGTAAACAGGAAAGTCAAAAACGC
AAACTTGATCGTCAAGCTTATGAAGAAGTGAGCGAGATTGGTCACAAGCTCAGCCTAAAAGAACTATATCTGGATGAATT
GGTGATTCTCCGAGACCAGCTAAAGAGCTATCAAGCTCAACTGAGTCCAGAGAAACAAGAGCAGTATGAGTGCTTACTAG
CCGATGAACGGTTCAAGGGTCGCCAAGCGATGATTCGAGAATTAAGAGCCTACTTAAAAGACTATAGCGATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comR/comR2 Streptococcus gordonii str. Challis substr. CH1

59.615

99.363

0.592
  comR/comR1 Streptococcus gordonii str. Challis substr. CH1

59.615

99.363

0.592
  comX/comX2 Streptococcus pneumoniae TIGR4

53.896

98.089

0.529
  comX/comX1 Streptococcus pneumoniae TIGR4

53.896

98.089

0.529
  comX/sigX/comX2/sigX2 Streptococcus mitis NCTC 12261

53.896

98.089

0.529
  comX/comX2 Streptococcus pneumoniae Rx1

53.247

98.089

0.522
  comX/comX1 Streptococcus pneumoniae Rx1

53.247

98.089

0.522
  comX/comX2 Streptococcus pneumoniae D39

53.247

98.089

0.522
  comX/comX1 Streptococcus pneumoniae D39

53.247

98.089

0.522
  comX/comX2 Streptococcus pneumoniae R6

53.247

98.089

0.522
  comX/comX1 Streptococcus pneumoniae R6

53.247

98.089

0.522
  comX/sigX/comX2/sigX2 Streptococcus mitis SK321

53.247

98.089

0.522
  comX/sigX/comX1/sigX1 Streptococcus mitis NCTC 12261

52.597

98.089

0.516
  comX/sigX/comX1/sigX1 Streptococcus mitis SK321

51.948

98.089

0.51
  comX/sigX Streptococcus mutans UA159

48.718

99.363

0.484
  comX/sigX Streptococcus suis D9

48.387

98.726

0.478
  comX/sigX Streptococcus suis isolate S10

48.387

98.726

0.478
  comX/sigX Streptococcus suis P1/7

48.387

98.726

0.478
  comX Streptococcus salivarius SK126

44.805

98.089

0.439
  comX/sigX Streptococcus salivarius strain HSISS4

44.156

98.089

0.433
  comX Streptococcus thermophilus LMG 18311

44.156

98.089

0.433
  comX Streptococcus thermophilus LMD-9

44.156

98.089

0.433
  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS8232

42.308

99.363

0.42
  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS8232

42.308

99.363

0.42
  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS315

42.308

99.363

0.42
  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS315

42.308

99.363

0.42
  comX/sigX/comX2/sigX2 Streptococcus pyogenes JRS4

42.308

99.363

0.42
  comX/sigX/comX1/sigX1 Streptococcus pyogenes JRS4

42.308

99.363

0.42
  comX/sigX Streptococcus infantarius subsp. infantarius ATCC BAA-102

37.821

99.363

0.376
  comX Streptococcus sobrinus strain NIDR 6715-7

38.562

97.452

0.376

Multiple sequence alignment