Detailed information NTG0065494

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: ANG_RS00590
• Genome accession: NZ_AP013072
• Coordinates: 105960..106433 (-)
• Length: 157 a.a.
• NCBI ID: WP_020999414.1
• Uniprot ID: -
• Organism: Streptococcus anginosus subsp. whileyi MAS624
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	104948..105901	105960..106433	flank	59

Gene organization within MGE regions

Location: 104948..106433

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ANG_RS00585 (ANG_0096)	-	104948..105901 (+)	954	WP_003034583.1	IS30 family transposase	-
ANG_RS00590 (ANG_0097)	comR/comR2	105960..106433 (-)	474	WP_020999414.1	sigma-70 family RNA polymerase sigma factor	Regulator

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19214.03 Da
• Isoelectric Point: 6.2636

>NTDB_id=65494 ANG_RS00590 WP_020999414.1 105960..106433(-) (comR/comR2) [Streptococcus anginosus subsp. whileyi MAS624]
MEFKELYAKVRGIVLKCCREYYVHLWELSDWDQEGMLVLYQLVSQYPQLVEEESQLYVYYKTKFRNHILDILRKQESQKR
KLDRQAYEEVSEIGHKLSLKELYLDELVILRDQLKSYQAQLSPEKQEQYERLLADERFKGRQAMIRELRAYLKDYSD

Nucleotide

• Length: 474 bp

>NTDB_id=65494 ANG_RS00590 WP_020999414.1 105960..106433(-) (comR/comR2) [Streptococcus anginosus subsp. whileyi MAS624]
ATGGAGTTCAAGGAGTTATATGCCAAGGTGAGAGGAATTGTACTAAAGTGCTGTCGGGAATATTATGTCCACCTGTGGGA
GTTAAGTGATTGGGACCAAGAGGGAATGTTGGTGCTCTATCAGTTGGTAAGCCAGTATCCGCAGCTGGTAGAAGAAGAAA
GTCAGCTCTATGTTTACTATAAGACCAAGTTCCGGAATCATATCCTGGACATCCTCCGTAAACAGGAAAGTCAAAAACGC
AAACTTGATCGTCAAGCTTATGAAGAAGTGAGCGAGATTGGTCACAAGCTCAGCCTAAAAGAACTATATCTGGATGAATT
GGTGATTCTCCGAGACCAGCTAAAGAGCTATCAAGCTCAACTGAGCCCAGAGAAACAGGAGCAGTACGAGCGCTTACTAG
CCGATGAACGGTTCAAAGGCCGCCAAGCTATGATTCGAGAATTAAGAGCCTACTTAAAAGATTATAGTGATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	60.256	99.363	0.599
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	60.256	99.363	0.599
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	53.896	98.089	0.529
comX/comX2	Streptococcus pneumoniae Rx1	53.247	98.089	0.522
comX/comX1	Streptococcus pneumoniae Rx1	53.247	98.089	0.522
comX/comX2	Streptococcus pneumoniae D39	53.247	98.089	0.522
comX/comX1	Streptococcus pneumoniae D39	53.247	98.089	0.522
comX/comX2	Streptococcus pneumoniae R6	53.247	98.089	0.522
comX/comX1	Streptococcus pneumoniae R6	53.247	98.089	0.522
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	53.247	98.089	0.522
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	52.597	98.089	0.516
comX/comX2	Streptococcus pneumoniae TIGR4	52.597	98.089	0.516
comX/comX1	Streptococcus pneumoniae TIGR4	52.597	98.089	0.516
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	52.597	98.089	0.516
comX/sigX	Streptococcus mutans UA159	48.718	99.363	0.484
comX/sigX	Streptococcus suis D9	47.742	98.726	0.471
comX/sigX	Streptococcus suis isolate S10	47.742	98.726	0.471
comX/sigX	Streptococcus suis P1/7	47.742	98.726	0.471
comX	Streptococcus salivarius SK126	44.156	98.089	0.433
comX/sigX	Streptococcus salivarius strain HSISS4	43.506	98.089	0.427
comX	Streptococcus thermophilus LMG 18311	43.506	98.089	0.427
comX	Streptococcus thermophilus LMD-9	43.506	98.089	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	42.308	99.363	0.42
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	42.308	99.363	0.42
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	42.308	99.363	0.42
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	42.308	99.363	0.42
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	42.308	99.363	0.42
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	42.308	99.363	0.42
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	37.821	99.363	0.376
comX	Streptococcus sobrinus strain NIDR 6715-7	38.562	97.452	0.376