Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | U771_RS29195 | Genome accession | NC_023064 |
| Coordinates | 6533814..6534848 (-) | Length | 344 a.a. |
| NCBI ID | WP_024077905.1 | Uniprot ID | - |
| Organism | Pseudomonas sp. TKP | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6528814..6539848
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| U771_RS29165 (U771_29810) | ruvX | 6528969..6529406 (+) | 438 | WP_003195067.1 | Holliday junction resolvase RuvX | - |
| U771_RS29170 (U771_29815) | pyrR | 6529490..6529996 (+) | 507 | WP_024077900.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| U771_RS29175 (U771_29820) | - | 6530021..6531025 (+) | 1005 | WP_024077901.1 | aspartate carbamoyltransferase catalytic subunit | - |
| U771_RS29180 (U771_29825) | - | 6531022..6532293 (+) | 1272 | WP_024077902.1 | dihydroorotase | - |
| U771_RS29185 (U771_29830) | - | 6532360..6532788 (-) | 429 | WP_024077903.1 | NINE protein | - |
| U771_RS29190 (U771_29835) | - | 6533039..6533674 (+) | 636 | WP_024077904.1 | C40 family peptidase | - |
| U771_RS29195 (U771_29840) | pilT | 6533814..6534848 (-) | 1035 | WP_024077905.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| U771_RS29200 (U771_29845) | - | 6534906..6535592 (+) | 687 | WP_024077906.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| U771_RS29205 (U771_29850) | proC | 6535626..6536444 (+) | 819 | WP_024077907.1 | pyrroline-5-carboxylate reductase | - |
| U771_RS29210 (U771_29855) | - | 6536469..6537056 (+) | 588 | WP_024077908.1 | YggT family protein | - |
| U771_RS29215 (U771_29860) | - | 6537182..6538321 (+) | 1140 | WP_024077909.1 | homoserine O-succinyltransferase MetX | - |
| U771_RS29220 (U771_29865) | metW | 6538329..6538949 (+) | 621 | WP_024077910.1 | methionine biosynthesis protein MetW | - |
| U771_RS29225 (U771_29870) | - | 6538971..6539405 (+) | 435 | WP_024077911.1 | DUF4426 domain-containing protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37482.31 Da Isoelectric Point: 6.6687
>NTDB_id=64112 U771_RS29195 WP_024077905.1 6533814..6534848(-) (pilT) [Pseudomonas sp. TKP]
MDITELLAHSVRQGASDLHLSAGLAPMLRVDGEVWPLDWPVLAPAQVANLLSPLLNQYQQKDFETSLETDFAFELPGVAR
FRVNVFQQARGMGAVFRTLAAEVQSLEALGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDYLNQHRRQHILTLED
PVEFIHTPKMALINQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTVDRL
VDVFPAGEKAMVRTMLSESLQAVVSQVLVKKLGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGAALGMKTLDMSL
KALVTEGVISREEAREKARVPGDI
MDITELLAHSVRQGASDLHLSAGLAPMLRVDGEVWPLDWPVLAPAQVANLLSPLLNQYQQKDFETSLETDFAFELPGVAR
FRVNVFQQARGMGAVFRTLAAEVQSLEALGLGEVFQRIAQLPRGLVLVTGPTGSGKSTTLAAMIDYLNQHRRQHILTLED
PVEFIHTPKMALINQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTTSAAKTVDRL
VDVFPAGEKAMVRTMLSESLQAVVSQVLVKKLGGGRVAAHEIMLGTPAIRNLIREDKVAQMVSAIQTGAALGMKTLDMSL
KALVTEGVISREEAREKARVPGDI
Nucleotide
Download Length: 1035 bp
>NTDB_id=64112 U771_RS29195 WP_024077905.1 6533814..6534848(-) (pilT) [Pseudomonas sp. TKP]
ATGGATATCACTGAATTACTGGCGCACAGCGTACGCCAGGGCGCCTCCGACCTGCATCTGTCGGCTGGCCTGGCGCCGAT
GCTGCGGGTGGACGGTGAGGTATGGCCGTTGGATTGGCCGGTACTGGCACCTGCCCAAGTGGCTAACTTATTGAGCCCTT
TGCTCAACCAATACCAACAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAACTGCCCGGTGTGGCGCGG
TTCCGGGTCAATGTATTTCAGCAGGCGCGCGGTATGGGGGCGGTGTTTCGCACGCTTGCAGCCGAGGTCCAGAGCTTGGA
AGCCCTTGGCCTGGGGGAGGTGTTCCAGCGTATTGCCCAGTTGCCGCGCGGCCTGGTACTGGTGACCGGACCCACCGGCT
CCGGCAAGTCCACCACCCTGGCGGCGATGATCGACTACCTCAATCAGCATCGGCGCCAGCACATCCTCACCCTCGAAGAC
CCTGTCGAGTTTATCCATACGCCGAAAATGGCCCTGATCAACCAGCGTCAGGTCCACCGCGACACCCACAGTTTTTCCAC
CGCCCTGCGTTCGGCCCTGCGGGAAGACCCGGATGTGATCCTTGTGGGCGAATTGCGCGACCTGGAAACCATTCGCCTGG
CGCTGACGGCCGCTGAGACCGGCCACCTGGTCTTTGGCACCCTGCACACCACCTCGGCGGCAAAGACCGTGGACAGGCTG
GTGGACGTGTTCCCGGCGGGGGAAAAGGCCATGGTCCGCACCATGCTGTCTGAGTCGCTGCAAGCGGTGGTGTCACAGGT
GTTGGTCAAGAAGCTCGGCGGTGGGCGGGTGGCCGCCCATGAAATCATGTTGGGCACGCCAGCCATCCGTAACTTGATCC
GCGAAGACAAGGTGGCGCAGATGGTCTCGGCGATTCAGACCGGTGCAGCGTTGGGGATGAAAACCTTGGATATGAGTTTG
AAGGCGTTGGTCACGGAAGGCGTGATCAGTCGGGAAGAGGCGCGGGAGAAGGCGAGGGTACCTGGGGATATCTGA
ATGGATATCACTGAATTACTGGCGCACAGCGTACGCCAGGGCGCCTCCGACCTGCATCTGTCGGCTGGCCTGGCGCCGAT
GCTGCGGGTGGACGGTGAGGTATGGCCGTTGGATTGGCCGGTACTGGCACCTGCCCAAGTGGCTAACTTATTGAGCCCTT
TGCTCAACCAATACCAACAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTGCCTTCGAACTGCCCGGTGTGGCGCGG
TTCCGGGTCAATGTATTTCAGCAGGCGCGCGGTATGGGGGCGGTGTTTCGCACGCTTGCAGCCGAGGTCCAGAGCTTGGA
AGCCCTTGGCCTGGGGGAGGTGTTCCAGCGTATTGCCCAGTTGCCGCGCGGCCTGGTACTGGTGACCGGACCCACCGGCT
CCGGCAAGTCCACCACCCTGGCGGCGATGATCGACTACCTCAATCAGCATCGGCGCCAGCACATCCTCACCCTCGAAGAC
CCTGTCGAGTTTATCCATACGCCGAAAATGGCCCTGATCAACCAGCGTCAGGTCCACCGCGACACCCACAGTTTTTCCAC
CGCCCTGCGTTCGGCCCTGCGGGAAGACCCGGATGTGATCCTTGTGGGCGAATTGCGCGACCTGGAAACCATTCGCCTGG
CGCTGACGGCCGCTGAGACCGGCCACCTGGTCTTTGGCACCCTGCACACCACCTCGGCGGCAAAGACCGTGGACAGGCTG
GTGGACGTGTTCCCGGCGGGGGAAAAGGCCATGGTCCGCACCATGCTGTCTGAGTCGCTGCAAGCGGTGGTGTCACAGGT
GTTGGTCAAGAAGCTCGGCGGTGGGCGGGTGGCCGCCCATGAAATCATGTTGGGCACGCCAGCCATCCGTAACTTGATCC
GCGAAGACAAGGTGGCGCAGATGGTCTCGGCGATTCAGACCGGTGCAGCGTTGGGGATGAAAACCTTGGATATGAGTTTG
AAGGCGTTGGTCACGGAAGGCGTGATCAGTCGGGAAGAGGCGCGGGAGAAGGCGAGGGTACCTGGGGATATCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.