Detailed information    

insolico Bioinformatically predicted

Overview

Name   comR/comR2   Type   Regulator
Locus tag   LK450_RS06805 Genome accession   NZ_CP085939
Coordinates   1385596..1386069 (-) Length   157 a.a.
NCBI ID   WP_003030979.1    Uniprot ID   A0A3S4MUK8
Organism   Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1380596..1391069
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LK450_RS06805 (LK450_06805) comR/comR2 1385596..1386069 (-) 474 WP_003030979.1 sigma-70 family RNA polymerase sigma factor Regulator
  LK450_RS06810 (LK450_06810) ftsH 1386274..1388244 (-) 1971 WP_003029496.1 ATP-dependent zinc metalloprotease FtsH -
  LK450_RS06815 (LK450_06815) hpt 1388265..1388807 (-) 543 WP_003032451.1 hypoxanthine phosphoribosyltransferase -
  LK450_RS06820 (LK450_06820) tilS 1388813..1390090 (-) 1278 WP_018543652.1 tRNA lysidine(34) synthetase TilS -

Sequence

Protein


Download         Length: 157 a.a.        Molecular weight: 19347.17 Da        Isoelectric Point: 7.3491

>NTDB_id=621418 LK450_RS06805 WP_003030979.1 1385596..1386069(-) (comR/comR2) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
MEFKELYGKVRGIVLKCRREYYVHLWELSDWEQEGMLVLYQLVSRYPQLVEEDHQLYVYYKTKFRNHILDILRKQESQKR
KLDRQAYEEVSEIGHKLSLKELYLDELVILRDQLKSYQSQLSPEKQEQYERLLADERFKGRQAMIRELRAYLKDYSD

Nucleotide


Download         Length: 474 bp        

>NTDB_id=621418 LK450_RS06805 WP_003030979.1 1385596..1386069(-) (comR/comR2) [Streptococcus anginosus subsp. anginosus strain FDAARGOS_1569]
ATGGAGTTCAAGGAGTTATATGGCAAGGTGAGAGGAATTGTGCTGAAGTGTCGGAGGGAATATTATGTCCACCTGTGGGA
ATTAAGCGATTGGGAACAAGAGGGCATGTTGGTGCTCTATCAGTTGGTGAGTCGCTATCCGCAGCTAGTAGAAGAAGATC
ATCAGCTCTATGTTTACTATAAGACCAAGTTCCGCAATCATATCCTGGACATCCTCCGTAAACAGGAAAGCCAAAAACGC
AAACTCGACCGACAAGCTTATGAAGAAGTGAGCGAGATTGGTCACAAGCTCAGCCTGAAAGAGTTGTATCTGGATGAACT
GGTGATTCTCCGGGACCAGCTAAAGAGTTACCAATCTCAACTGAGTCCAGAGAAACAAGAACAGTACGAGCGCTTACTAG
CCGACGAACGGTTCAAAGGCCGCCAAGCGATGATTCGAGAATTAAGAGCCTACTTAAAAGACTATAGCGATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A3S4MUK8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comR/comR2 Streptococcus gordonii str. Challis substr. CH1

60.897

99.363

0.605
  comR/comR1 Streptococcus gordonii str. Challis substr. CH1

60.897

99.363

0.605
  comX/sigX/comX2/sigX2 Streptococcus mitis NCTC 12261

54.545

98.089

0.535
  comX/comX2 Streptococcus pneumoniae TIGR4

54.545

98.089

0.535
  comX/comX1 Streptococcus pneumoniae TIGR4

54.545

98.089

0.535
  comX/sigX/comX2/sigX2 Streptococcus mitis SK321

54.545

98.089

0.535
  comX/comX2 Streptococcus pneumoniae D39

53.896

98.089

0.529
  comX/comX2 Streptococcus pneumoniae Rx1

53.896

98.089

0.529
  comX/comX1 Streptococcus pneumoniae Rx1

53.896

98.089

0.529
  comX/comX1 Streptococcus pneumoniae D39

53.896

98.089

0.529
  comX/comX2 Streptococcus pneumoniae R6

53.896

98.089

0.529
  comX/comX1 Streptococcus pneumoniae R6

53.896

98.089

0.529
  comX/sigX/comX1/sigX1 Streptococcus mitis NCTC 12261

53.247

98.089

0.522
  comX/sigX/comX1/sigX1 Streptococcus mitis SK321

53.247

98.089

0.522
  comX/sigX Streptococcus mutans UA159

49.359

99.363

0.49
  comX/sigX Streptococcus suis D9

48.387

98.726

0.478
  comX/sigX Streptococcus suis isolate S10

48.387

98.726

0.478
  comX/sigX Streptococcus suis P1/7

48.387

98.726

0.478
  comX Streptococcus salivarius SK126

45.455

98.089

0.446
  comX/sigX Streptococcus salivarius strain HSISS4

44.805

98.089

0.439
  comX Streptococcus thermophilus LMG 18311

44.805

98.089

0.439
  comX Streptococcus thermophilus LMD-9

44.805

98.089

0.439
  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS8232

42.308

99.363

0.42
  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS8232

42.308

99.363

0.42
  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS315

42.308

99.363

0.42
  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS315

42.308

99.363

0.42
  comX/sigX/comX2/sigX2 Streptococcus pyogenes JRS4

42.308

99.363

0.42
  comX/sigX/comX1/sigX1 Streptococcus pyogenes JRS4

42.308

99.363

0.42
  comX/sigX Streptococcus infantarius subsp. infantarius ATCC BAA-102

37.821

99.363

0.376
  comX Streptococcus sobrinus strain NIDR 6715-7

38.562

97.452

0.376