Detailed information NTG0061634

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: SANR_RS00070
• Genome accession: NC_022239
• Coordinates: 15110..15583 (+)
• Length: 157 a.a.
• NCBI ID: WP_020999414.1
• Uniprot ID: -
• Organism: Streptococcus anginosus C238
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	15642..16595	15110..15583	flank	59

Gene organization within MGE regions

Location: 15110..16595

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SANR_RS00070 (SANR_0015)	comR/comR2	15110..15583 (+)	474	WP_020999414.1	sigma-70 family RNA polymerase sigma factor	Regulator
SANR_RS00075 (SANR_0016)	-	15642..16595 (-)	954	WP_003034583.1	IS30 family transposase	-

Sequence

Protein

• Length: 157 a.a.
• Molecular weight: 19214.03 Da
• Isoelectric Point: 6.2636

>NTDB_id=61634 SANR_RS00070 WP_020999414.1 15110..15583(+) (comR/comR2) [Streptococcus anginosus C238]
MEFKELYAKVRGIVLKCCREYYVHLWELSDWDQEGMLVLYQLVSQYPQLVEEESQLYVYYKTKFRNHILDILRKQESQKR
KLDRQAYEEVSEIGHKLSLKELYLDELVILRDQLKSYQAQLSPEKQEQYERLLADERFKGRQAMIRELRAYLKDYSD

Nucleotide

• Length: 474 bp

>NTDB_id=61634 SANR_RS00070 WP_020999414.1 15110..15583(+) (comR/comR2) [Streptococcus anginosus C238]
ATGGAGTTCAAGGAGTTATATGCCAAGGTGAGAGGAATTGTACTAAAGTGCTGTCGGGAATATTATGTCCACCTGTGGGA
GTTAAGTGATTGGGACCAAGAGGGAATGTTGGTGCTCTATCAGTTGGTAAGCCAGTATCCGCAGCTGGTAGAAGAAGAAA
GTCAGCTCTATGTTTACTATAAGACCAAGTTCCGGAATCATATCCTGGACATCCTCCGTAAACAGGAAAGTCAAAAACGC
AAACTTGATCGTCAAGCTTATGAAGAAGTGAGCGAGATTGGTCACAAGCTCAGCCTAAAAGAACTATATCTGGATGAATT
GGTGATTCTCCGAGACCAGCTAAAGAGCTATCAAGCTCAACTGAGCCCAGAGAAACAGGAGCAGTACGAGCGCTTACTAG
CCGATGAACGGTTCAAAGGCCGCCAAGCTATGATTCGAGAATTAAGAGCCTACTTAAAAGATTATAGTGATTAA

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	60.256	99.363	0.599
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	60.256	99.363	0.599
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	53.896	98.089	0.529
comX/comX2	Streptococcus pneumoniae Rx1	53.247	98.089	0.522
comX/comX1	Streptococcus pneumoniae Rx1	53.247	98.089	0.522
comX/comX2	Streptococcus pneumoniae D39	53.247	98.089	0.522
comX/comX1	Streptococcus pneumoniae D39	53.247	98.089	0.522
comX/comX2	Streptococcus pneumoniae R6	53.247	98.089	0.522
comX/comX1	Streptococcus pneumoniae R6	53.247	98.089	0.522
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	53.247	98.089	0.522
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	52.597	98.089	0.516
comX/comX2	Streptococcus pneumoniae TIGR4	52.597	98.089	0.516
comX/comX1	Streptococcus pneumoniae TIGR4	52.597	98.089	0.516
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	52.597	98.089	0.516
comX/sigX	Streptococcus mutans UA159	48.718	99.363	0.484
comX/sigX	Streptococcus suis D9	47.742	98.726	0.471
comX/sigX	Streptococcus suis isolate S10	47.742	98.726	0.471
comX/sigX	Streptococcus suis P1/7	47.742	98.726	0.471
comX	Streptococcus salivarius SK126	44.156	98.089	0.433
comX/sigX	Streptococcus salivarius strain HSISS4	43.506	98.089	0.427
comX	Streptococcus thermophilus LMG 18311	43.506	98.089	0.427
comX	Streptococcus thermophilus LMD-9	43.506	98.089	0.427
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	42.308	99.363	0.42
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	42.308	99.363	0.42
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	42.308	99.363	0.42
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	42.308	99.363	0.42
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	42.308	99.363	0.42
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	42.308	99.363	0.42
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	37.821	99.363	0.376
comX	Streptococcus sobrinus strain NIDR 6715-7	38.562	97.452	0.376