Detailed information
Bioinformatically predicted
Overview
| Name | pilT | Type | Machinery gene |
| Locus tag | HU773_RS26350 | Genome accession | NZ_CP077085 |
| Coordinates | 5857449..5858483 (-) | Length | 344 a.a. |
| NCBI ID | WP_170059529.1 | Uniprot ID | - |
| Organism | Pseudomonas shahriarae strain SWRI52 | ||
| Function | type IV pilus retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5852449..5863483
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HU773_RS26320 (HU773_026320) | ruvX | 5852531..5852968 (+) | 438 | WP_005792259.1 | Holliday junction resolvase RuvX | - |
| HU773_RS26325 (HU773_026325) | pyrR | 5853051..5853557 (+) | 507 | WP_057444186.1 | bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR | - |
| HU773_RS26330 (HU773_026330) | - | 5853582..5854586 (+) | 1005 | WP_057440370.1 | aspartate carbamoyltransferase catalytic subunit | - |
| HU773_RS26335 (HU773_026335) | - | 5854583..5855854 (+) | 1272 | WP_057440371.1 | dihydroorotase | - |
| HU773_RS26340 (HU773_026340) | - | 5856017..5856445 (-) | 429 | WP_057440372.1 | NINE protein | - |
| HU773_RS26345 (HU773_026345) | - | 5856695..5857330 (+) | 636 | WP_057440373.1 | C40 family peptidase | - |
| HU773_RS26350 (HU773_026350) | pilT | 5857449..5858483 (-) | 1035 | WP_170059529.1 | type IV pilus twitching motility protein PilT | Machinery gene |
| HU773_RS26355 (HU773_026355) | - | 5858541..5859227 (+) | 687 | WP_057960885.1 | YggS family pyridoxal phosphate-dependent enzyme | - |
| HU773_RS26360 (HU773_026360) | proC | 5859261..5860079 (+) | 819 | WP_057960886.1 | pyrroline-5-carboxylate reductase | - |
| HU773_RS26365 (HU773_026365) | - | 5860089..5860679 (+) | 591 | WP_057440376.1 | YggT family protein | - |
| HU773_RS26370 (HU773_026370) | - | 5860834..5861973 (+) | 1140 | WP_057440377.1 | homoserine O-succinyltransferase MetX | - |
| HU773_RS26375 (HU773_026375) | metW | 5861981..5862601 (+) | 621 | WP_029300485.1 | methionine biosynthesis protein MetW | - |
| HU773_RS26380 (HU773_026380) | - | 5862623..5863057 (+) | 435 | WP_029300487.1 | DUF4426 domain-containing protein | - |
Sequence
Protein
Download Length: 344 a.a. Molecular weight: 37322.97 Da Isoelectric Point: 6.8923
>NTDB_id=578951 HU773_RS26350 WP_170059529.1 5857449..5858483(-) (pilT) [Pseudomonas shahriarae strain SWRI52]
MDITELLAASVSQGASDLHLSAGLAPRMRVDGEVLPLDWPVLSATQVADLLSPILHKHQQKDFETSLETDFSFDLPGVAR
FRANVFCQHRGLGAVFRAIPSRVQSLEALGLGDIFRRIAELPRGLVLVTGATGSGKSTTLAAMVDYLNSTRQQHILTLED
PIEFVHEPRKALISQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTNSAAKTVDRL
VDVFPAGEKAMVRSMLSESLQAVVSQVLLKKVGGGRVAAHEIMLGTPAIRNLIREDKVAQLYSAIQTGGALGMKTLDMSL
KGLVSQGLVRLEEAREQARVPADI
MDITELLAASVSQGASDLHLSAGLAPRMRVDGEVLPLDWPVLSATQVADLLSPILHKHQQKDFETSLETDFSFDLPGVAR
FRANVFCQHRGLGAVFRAIPSRVQSLEALGLGDIFRRIAELPRGLVLVTGATGSGKSTTLAAMVDYLNSTRQQHILTLED
PIEFVHEPRKALISQRQVHRDTHSFSTALRSALREDPDVILVGELRDLETIRLALTAAETGHLVFGTLHTNSAAKTVDRL
VDVFPAGEKAMVRSMLSESLQAVVSQVLLKKVGGGRVAAHEIMLGTPAIRNLIREDKVAQLYSAIQTGGALGMKTLDMSL
KGLVSQGLVRLEEAREQARVPADI
Nucleotide
Download Length: 1035 bp
>NTDB_id=578951 HU773_RS26350 WP_170059529.1 5857449..5858483(-) (pilT) [Pseudomonas shahriarae strain SWRI52]
ATGGACATCACTGAACTGCTGGCCGCAAGCGTCAGCCAGGGCGCCTCCGACCTGCATCTGTCGGCAGGCTTGGCGCCGAG
GATGCGCGTCGATGGCGAGGTACTGCCACTGGATTGGCCGGTGCTGAGTGCTACGCAAGTAGCTGACTTGCTCAGCCCGA
TCCTCCATAAACACCAGCAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTTCCTTCGATTTGCCTGGCGTCGCGCGC
TTTCGCGCCAACGTGTTCTGCCAGCACCGGGGGCTGGGGGCGGTGTTCCGTGCGATCCCCTCTCGGGTCCAGAGCCTGGA
AGCCCTGGGGCTGGGGGACATATTCCGGCGCATCGCCGAATTGCCCAGAGGGCTGGTGCTGGTGACTGGTGCCACGGGCT
CGGGCAAGTCCACCACCCTGGCGGCGATGGTCGATTACCTCAACAGCACCCGTCAGCAGCACATCCTGACCCTTGAAGAC
CCTATCGAGTTTGTCCACGAACCGCGTAAAGCGCTGATCAGCCAACGCCAGGTGCACCGCGACACCCACAGTTTCTCGAC
GGCCCTGCGTTCGGCGTTGCGCGAAGACCCGGATGTGATCCTGGTTGGCGAGTTGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACGGCGGCGGAAACCGGGCACTTGGTGTTTGGCACCCTGCACACCAATTCGGCGGCGAAAACCGTGGATCGGCTG
GTGGATGTGTTTCCGGCGGGGGAAAAGGCCATGGTCCGCTCGATGCTCTCGGAATCGCTGCAGGCGGTGGTGTCCCAGGT
GTTGCTGAAGAAAGTCGGCGGCGGGCGCGTGGCGGCCCATGAAATCATGCTCGGCACACCGGCGATCCGCAACCTGATCC
GCGAGGACAAGGTGGCGCAGTTGTATTCGGCGATTCAGACGGGCGGGGCGCTGGGGATGAAGACGTTGGATATGAGCTTG
AAGGGGTTGGTCAGTCAGGGACTGGTCAGGCTTGAAGAGGCCCGGGAGCAGGCGCGGGTGCCCGCAGATATATAG
ATGGACATCACTGAACTGCTGGCCGCAAGCGTCAGCCAGGGCGCCTCCGACCTGCATCTGTCGGCAGGCTTGGCGCCGAG
GATGCGCGTCGATGGCGAGGTACTGCCACTGGATTGGCCGGTGCTGAGTGCTACGCAAGTAGCTGACTTGCTCAGCCCGA
TCCTCCATAAACACCAGCAAAAGGATTTCGAAACATCTCTTGAAACGGATTTTTCCTTCGATTTGCCTGGCGTCGCGCGC
TTTCGCGCCAACGTGTTCTGCCAGCACCGGGGGCTGGGGGCGGTGTTCCGTGCGATCCCCTCTCGGGTCCAGAGCCTGGA
AGCCCTGGGGCTGGGGGACATATTCCGGCGCATCGCCGAATTGCCCAGAGGGCTGGTGCTGGTGACTGGTGCCACGGGCT
CGGGCAAGTCCACCACCCTGGCGGCGATGGTCGATTACCTCAACAGCACCCGTCAGCAGCACATCCTGACCCTTGAAGAC
CCTATCGAGTTTGTCCACGAACCGCGTAAAGCGCTGATCAGCCAACGCCAGGTGCACCGCGACACCCACAGTTTCTCGAC
GGCCCTGCGTTCGGCGTTGCGCGAAGACCCGGATGTGATCCTGGTTGGCGAGTTGCGCGACCTGGAAACCATCCGCCTGG
CCCTGACGGCGGCGGAAACCGGGCACTTGGTGTTTGGCACCCTGCACACCAATTCGGCGGCGAAAACCGTGGATCGGCTG
GTGGATGTGTTTCCGGCGGGGGAAAAGGCCATGGTCCGCTCGATGCTCTCGGAATCGCTGCAGGCGGTGGTGTCCCAGGT
GTTGCTGAAGAAAGTCGGCGGCGGGCGCGTGGCGGCCCATGAAATCATGCTCGGCACACCGGCGATCCGCAACCTGATCC
GCGAGGACAAGGTGGCGCAGTTGTATTCGGCGATTCAGACGGGCGGGGCGCTGGGGATGAAGACGTTGGATATGAGCTTG
AAGGGGTTGGTCAGTCAGGGACTGGTCAGGCTTGAAGAGGCCCGGGAGCAGGCGCGGGTGCCCGCAGATATATAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.