Detailed information NTG0056009

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: SCSC_RS08485
• Genome accession: NZ_AP014647
• Coordinates: 1724600..1725082 (-)
• Length: 160 a.a.
• NCBI ID: WP_037598771.1
• Uniprot ID: -
• Organism: Streptococcus constellatus subsp. constellatus strain CCUG 24889
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 1719600..1730082

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCSC_RS08485 (SCSC_1750)	comR/comR2	1724600..1725082 (-)	483	WP_037598771.1	sigma-70 family RNA polymerase sigma factor	Regulator
SCSC_RS08490 (SCSC_1751)	rplQ	1725514..1725900 (-)	387	WP_003071313.1	50S ribosomal protein L17	-
SCSC_RS08495 (SCSC_1752)	-	1725912..1726850 (-)	939	WP_003071316.1	DNA-directed RNA polymerase subunit alpha	-
SCSC_RS08500 (SCSC_1753)	rpsK	1726895..1727278 (-)	384	WP_001118385.1	30S ribosomal protein S11	-
SCSC_RS08505 (SCSC_1754)	rpsM	1727298..1727663 (-)	366	WP_002262317.1	30S ribosomal protein S13	-
SCSC_RS08510	rpmJ	1727679..1727795 (-)	117	WP_001808836.1	50S ribosomal protein L36	-
SCSC_RS08515 (SCSC_1755)	infA	1727820..1728038 (-)	219	WP_001029883.1	translation initiation factor IF-1	-
SCSC_RS08520 (SCSC_1756)	-	1728155..1728793 (-)	639	WP_006270468.1	adenylate kinase	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 19753.61 Da
• Isoelectric Point: 8.6079

>NTDB_id=56009 SCSC_RS08485 WP_037598771.1 1724600..1725082(-) (comR/comR2) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
MDFKELYDKVRGIVLKCRREYYVHLWELSDWDQEGMLVLYELVSRYPQLVESESRLYVYYKTKFRNHIKDILRKQESQKR
KLDRQAYEEVSEIGHKLSLKELYLDELVILRAQLKSYQKQLSPEKQEQYERLLADERFQGRQAMLRELRAYLQDYDERKS

Nucleotide

• Length: 483 bp

>NTDB_id=56009 SCSC_RS08485 WP_037598771.1 1724600..1725082(-) (comR/comR2) [Streptococcus constellatus subsp. constellatus strain CCUG 24889]
ATGGACTTCAAGGAGTTGTATGACAAAGTGAGAGGGATCGTACTGAAGTGTCGCCGGGAATATTATGTCCACCTGTGGGA
GTTAAGTGATTGGGACCAAGAAGGGATGCTGGTCTTATATGAGTTGGTGAGTCGCTATCCGCAACTGGTAGAGTCAGAAA
GTCGTCTCTATGTTTACTATAAGACCAAGTTCCGTAATCACATCAAGGACATCCTGCGCAAACAAGAAAGCCAAAAGCGC
AAACTAGACCGTCAAGCTTATGAGGAAGTGAGCGAGATAGGTCACAAGCTCAGCCTGAAAGAACTCTATTTGGATGAATT
GGTGATTCTCCGAGCCCAACTAAAGAGCTATCAAAAGCAGCTAAGTCCAGAGAAACAAGAACAGTATGAGCGCTTACTAG
CAGATGAACGGTTTCAAGGACGCCAAGCGATGCTTCGGGAGTTACGGGCCTACTTACAAGATTACGATGAAAGAAAAAGC
TAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	61.392	98.75	0.606
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	61.392	98.75	0.606
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	56.41	97.5	0.55
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	55.769	97.5	0.544
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	55.128	97.5	0.537
comX/comX1	Streptococcus pneumoniae R6	55.556	95.625	0.531
comX/comX1	Streptococcus pneumoniae D39	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae Rx1	55.556	95.625	0.531
comX/comX1	Streptococcus pneumoniae Rx1	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae D39	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae R6	55.556	95.625	0.531
comX/comX2	Streptococcus pneumoniae TIGR4	54.487	97.5	0.531
comX/comX1	Streptococcus pneumoniae TIGR4	54.487	97.5	0.531
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	54.487	97.5	0.531
comX/sigX	Streptococcus mutans UA159	49.682	98.125	0.488
comX/sigX	Streptococcus suis D9	46.452	96.875	0.45
comX/sigX	Streptococcus suis isolate S10	46.452	96.875	0.45
comX/sigX	Streptococcus suis P1/7	46.452	96.875	0.45
comX	Streptococcus salivarius SK126	43.506	96.25	0.419
comX/sigX	Streptococcus salivarius strain HSISS4	42.857	96.25	0.412
comX	Streptococcus thermophilus LMG 18311	42.857	96.25	0.412
comX	Streptococcus thermophilus LMD-9	42.857	96.25	0.412
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	41.401	98.125	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	41.401	98.125	0.406
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	41.401	98.125	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	41.401	98.125	0.406
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	41.401	98.125	0.406
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	41.401	98.125	0.406
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	39.103	97.5	0.381
comX	Streptococcus sobrinus strain NIDR 6715-7	37.419	96.875	0.362