Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | JZ789_RS00075 | Genome accession | NZ_CP071806 |
| Coordinates | 15952..16422 (+) | Length | 156 a.a. |
| NCBI ID | WP_002936602.1 | Uniprot ID | A0A075SE61 |
| Organism | Streptococcus suis strain GX69 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 13656..44175 | 15952..16422 | within | 0 |
Gene organization within MGE regions
Location: 13656..44175
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JZ789_RS00070 (JZ789_00070) | ftsH | 13656..15626 (+) | 1971 | WP_004194314.1 | ATP-dependent zinc metalloprotease FtsH | - |
| JZ789_RS00075 (JZ789_00075) | comX/sigX | 15952..16422 (+) | 471 | WP_002936602.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
| JZ789_RS00180 (JZ789_00180) | mreC | 23812..24648 (+) | 837 | WP_024417842.1 | rod shape-determining protein MreC | - |
| JZ789_RS00185 (JZ789_00185) | mreD | 24665..25153 (+) | 489 | WP_009908846.1 | rod shape-determining protein MreD | - |
| JZ789_RS00190 (JZ789_00190) | pcsB | 25238..26494 (+) | 1257 | WP_002935338.1 | peptidoglycan hydrolase PcsB | - |
| JZ789_RS00195 (JZ789_00195) | - | 26597..27565 (+) | 969 | WP_002935337.1 | ribose-phosphate diphosphokinase | - |
| JZ789_RS00200 (JZ789_00200) | - | 27652..28830 (+) | 1179 | WP_002935336.1 | pyridoxal phosphate-dependent aminotransferase | - |
| JZ789_RS00205 (JZ789_00205) | recO | 28817..29599 (+) | 783 | WP_002935335.1 | DNA repair protein RecO | - |
| JZ789_RS00210 (JZ789_00210) | plsX | 29596..30603 (+) | 1008 | WP_002935334.1 | phosphate acyltransferase PlsX | - |
| JZ789_RS00215 (JZ789_00215) | - | 30596..30844 (+) | 249 | WP_002935333.1 | phosphopantetheine-binding protein | - |
| JZ789_RS00220 (JZ789_00220) | purC | 30962..31669 (+) | 708 | WP_002935328.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| JZ789_RS00225 (JZ789_00225) | - | 31682..35401 (+) | 3720 | WP_002935327.1 | phosphoribosylformylglycinamidine synthase | - |
| JZ789_RS00230 (JZ789_00230) | purF | 35404..36858 (+) | 1455 | WP_002935326.1 | amidophosphoribosyltransferase | - |
| JZ789_RS00235 (JZ789_00235) | purM | 36914..37936 (+) | 1023 | WP_009908859.1 | phosphoribosylformylglycinamidine cyclo-ligase | - |
| JZ789_RS00240 (JZ789_00240) | purN | 37933..38484 (+) | 552 | WP_009908860.1 | phosphoribosylglycinamide formyltransferase | - |
| JZ789_RS00245 (JZ789_00245) | purH | 38494..40041 (+) | 1548 | WP_174846764.1 | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase | - |
| JZ789_RS00250 (JZ789_00250) | - | 40106..40936 (+) | 831 | WP_002935322.1 | DNA adenine methylase | - |
| JZ789_RS00255 (JZ789_00255) | - | 40926..41741 (+) | 816 | WP_032499218.1 | site-specific DNA-methyltransferase | - |
| JZ789_RS00260 (JZ789_00260) | - | 41719..42417 (+) | 699 | WP_226315416.1 | type II restriction endonuclease | - |
| JZ789_RS00265 (JZ789_00265) | ltrA | 42502..44175 (-) | 1674 | WP_044680551.1 | group II intron reverse transcriptase/maturase | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 19072.97 Da Isoelectric Point: 8.9339
>NTDB_id=547928 JZ789_RS00075 WP_002936602.1 15952..16422(+) (comX/sigX) [Streptococcus suis strain GX69]
MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLEAQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKR
KFDRMPHEDIHELSHAIQSPGLINDELLMLRGALRDYRKNLSNDQLDKYEKLISGQCFNGRREMIRDLQIHLKDFR
MEFEKVYASVKGIVNKARKEFYIKLWDRDDWEQEGMMTLFELLEAQPWLVDEQVQLYCYFKVKFRNRIKDRIRKQESQKR
KFDRMPHEDIHELSHAIQSPGLINDELLMLRGALRDYRKNLSNDQLDKYEKLISGQCFNGRREMIRDLQIHLKDFR
Nucleotide
Download Length: 471 bp
>NTDB_id=547928 JZ789_RS00075 WP_002936602.1 15952..16422(+) (comX/sigX) [Streptococcus suis strain GX69]
ATGGAATTCGAAAAAGTGTACGCAAGCGTCAAAGGTATTGTAAATAAGGCTCGAAAAGAGTTTTACATTAAACTATGGGA
TCGAGATGATTGGGAACAAGAAGGAATGATGACCTTGTTTGAATTGTTGGAAGCTCAACCGTGGCTAGTTGATGAACAAG
TTCAATTATATTGTTATTTTAAAGTCAAGTTCAGAAATCGAATCAAGGATCGTATCCGCAAACAGGAAAGTCAAAAACGC
AAGTTTGACCGTATGCCACATGAAGATATTCACGAATTATCTCACGCAATACAATCACCGGGATTAATAAACGATGAACT
ATTAATGCTAAGAGGTGCCTTGAGAGATTATCGAAAAAATCTGAGTAATGATCAACTTGATAAATACGAAAAATTAATTA
GCGGACAATGTTTTAATGGTCGCCGTGAAATGATACGTGATTTACAAATTCATTTGAAAGACTTTCGCTAA
ATGGAATTCGAAAAAGTGTACGCAAGCGTCAAAGGTATTGTAAATAAGGCTCGAAAAGAGTTTTACATTAAACTATGGGA
TCGAGATGATTGGGAACAAGAAGGAATGATGACCTTGTTTGAATTGTTGGAAGCTCAACCGTGGCTAGTTGATGAACAAG
TTCAATTATATTGTTATTTTAAAGTCAAGTTCAGAAATCGAATCAAGGATCGTATCCGCAAACAGGAAAGTCAAAAACGC
AAGTTTGACCGTATGCCACATGAAGATATTCACGAATTATCTCACGCAATACAATCACCGGGATTAATAAACGATGAACT
ATTAATGCTAAGAGGTGCCTTGAGAGATTATCGAAAAAATCTGAGTAATGATCAACTTGATAAATACGAAAAATTAATTA
GCGGACAATGTTTTAATGGTCGCCGTGAAATGATACGTGATTTACAAATTCATTTGAAAGACTTTCGCTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.