Detailed information    

insolico Bioinformatically predicted

Overview


Name   comR/comR2   Type   Regulator
Locus tag   I6K87_RS08335 Genome accession   NZ_CP069892
Coordinates   1675852..1676325 (+) Length   157 a.a.
NCBI ID   WP_049517056.1    Uniprot ID   A0A2T0G8Q5
Organism   Streptococcus anginosus strain FDAARGOS_1357     
Function   activate transcription of late competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1670852..1681325
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K87_RS08300 (I6K87_08300) - 1672155..1672793 (+) 639 WP_049517057.1 adenylate kinase -
  I6K87_RS08305 (I6K87_08305) infA 1672910..1673128 (+) 219 WP_001029883.1 translation initiation factor IF-1 -
  I6K87_RS08310 (I6K87_08310) rpmJ 1673153..1673269 (+) 117 WP_001808836.1 50S ribosomal protein L36 -
  I6K87_RS08315 (I6K87_08315) rpsM 1673285..1673650 (+) 366 WP_002262317.1 30S ribosomal protein S13 -
  I6K87_RS08320 (I6K87_08320) rpsK 1673670..1674053 (+) 384 WP_001118385.1 30S ribosomal protein S11 -
  I6K87_RS08325 (I6K87_08325) - 1674098..1675036 (+) 939 WP_003026514.1 DNA-directed RNA polymerase subunit alpha -
  I6K87_RS08330 (I6K87_08330) rplQ 1675048..1675434 (+) 387 WP_003026513.1 50S ribosomal protein L17 -
  I6K87_RS08335 (I6K87_08335) comR/comR2 1675852..1676325 (+) 474 WP_049517056.1 sigma-70 family RNA polymerase sigma factor Regulator
  I6K87_RS08340 (I6K87_08340) rpsB 1676558..1677340 (+) 783 WP_003026510.1 30S ribosomal protein S2 -
  I6K87_RS08345 (I6K87_08345) tsf 1677423..1678466 (+) 1044 WP_204982543.1 translation elongation factor Ts -
  I6K87_RS08350 (I6K87_08350) - 1678553..1678903 (-) 351 WP_204982544.1 hypothetical protein -
  I6K87_RS08355 (I6K87_08355) - 1679163..1679624 (+) 462 WP_049533054.1 CtsR family transcriptional regulator -

Sequence


Protein


Download         Length: 157 a.a.        Molecular weight: 19266.09 Da        Isoelectric Point: 7.2707

>NTDB_id=537280 I6K87_RS08335 WP_049517056.1 1675852..1676325(+) (comR/comR2) [Streptococcus anginosus strain FDAARGOS_1357]
MEFKELYGKVRGIVLKCRREYYVHLWELSDWEQEGMLVLYQLVSQYPQLVEEESQLYVYYKTKFRNHILDILRKQESQKR
KLNRQAYEEVSEIGHKLSLKELYLDELVILRDQLKSYQAQLSPEKQEQYERLLADERFKGRQAMIRELRAYLKDYSD

Nucleotide


Download         Length: 474 bp        

>NTDB_id=537280 I6K87_RS08335 WP_049517056.1 1675852..1676325(+) (comR/comR2) [Streptococcus anginosus strain FDAARGOS_1357]
ATGGAGTTCAAGGAGTTATATGGCAAGGTGAGAGGAATTGTGCTGAAGTGTCGGAGGGAATATTATGTCCACCTGTGGGA
ATTAAGCGATTGGGAACAAGAGGGCATGTTGGTGCTCTATCAGTTGGTAAGCCAGTATCCGCAGCTGGTAGAAGAAGAAA
GTCAGCTCTATGTTTACTATAAGACCAAGTTCCGGAATCATATCCTGGACATCCTCCGTAAACAGGAAAGTCAAAAACGC
AAACTTAATCGTCAAGCTTATGAAGAAGTGAGCGAGATTGGTCACAAGCTCAGCCTAAAAGAACTATATCTGGATGAATT
GGTGATTCTCCGAGACCAGCTAAAGAGCTATCAAGCTCAACTGAGCCCAGAGAAACAGGAGCAGTATGAGCGCTTACTAG
CCGATGAACGGTTCAAAGGCCGCCAAGCCATGATTCGAGAATTAAGAGCCTACTTAAAAGACTATAGCGATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2T0G8Q5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comR/comR2 Streptococcus gordonii str. Challis substr. CH1

59.615

99.363

0.592

  comR/comR1 Streptococcus gordonii str. Challis substr. CH1

59.615

99.363

0.592

  comX/sigX/comX2/sigX2 Streptococcus mitis NCTC 12261

53.247

98.089

0.522

  comX/comX2 Streptococcus pneumoniae TIGR4

53.247

98.089

0.522

  comX/comX1 Streptococcus pneumoniae TIGR4

53.247

98.089

0.522

  comX/comX2 Streptococcus pneumoniae Rx1

52.597

98.089

0.516

  comX/comX1 Streptococcus pneumoniae Rx1

52.597

98.089

0.516

  comX/comX2 Streptococcus pneumoniae D39

52.597

98.089

0.516

  comX/comX1 Streptococcus pneumoniae D39

52.597

98.089

0.516

  comX/comX2 Streptococcus pneumoniae R6

52.597

98.089

0.516

  comX/comX1 Streptococcus pneumoniae R6

52.597

98.089

0.516

  comX/sigX/comX2/sigX2 Streptococcus mitis SK321

52.597

98.089

0.516

  comX/sigX/comX1/sigX1 Streptococcus mitis NCTC 12261

51.948

98.089

0.51

  comX/sigX/comX1/sigX1 Streptococcus mitis SK321

51.948

98.089

0.51

  comX/sigX Streptococcus mutans UA159

49.359

99.363

0.49

  comX/sigX Streptococcus suis D9

47.742

98.726

0.471

  comX/sigX Streptococcus suis isolate S10

47.742

98.726

0.471

  comX/sigX Streptococcus suis P1/7

47.742

98.726

0.471

  comX Streptococcus salivarius SK126

45.455

98.089

0.446

  comX/sigX Streptococcus salivarius strain HSISS4

44.805

98.089

0.439

  comX Streptococcus thermophilus LMG 18311

44.805

98.089

0.439

  comX Streptococcus thermophilus LMD-9

44.805

98.089

0.439

  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS8232

42.308

99.363

0.42

  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS8232

42.308

99.363

0.42

  comX/sigX/comX2/sigX2 Streptococcus pyogenes MGAS315

42.308

99.363

0.42

  comX/sigX/comX1/sigX1 Streptococcus pyogenes MGAS315

42.308

99.363

0.42

  comX/sigX/comX2/sigX2 Streptococcus pyogenes JRS4

42.308

99.363

0.42

  comX/sigX/comX1/sigX1 Streptococcus pyogenes JRS4

42.308

99.363

0.42

  comX/sigX Streptococcus infantarius subsp. infantarius ATCC BAA-102

39.103

99.363

0.389

  comX Streptococcus sobrinus strain NIDR 6715-7

37.662

98.089

0.369