Detailed information
Bioinformatically predicted
Overview
| Name | comR/comR2 | Type | Regulator |
| Locus tag | I6J38_RS06785 | Genome accession | NZ_CP069558 |
| Coordinates | 1362666..1363148 (-) | Length | 160 a.a. |
| NCBI ID | WP_006267672.1 | Uniprot ID | A0A380L5Q1 |
| Organism | Streptococcus constellatus strain FDAARGOS_1208 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
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Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Genomic island | 1349880..1363148 | 1362666..1363148 | within | 0 |
Gene organization within MGE regions
Location: 1349880..1363148
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6J38_RS06660 (I6J38_06660) | - | 1349880..1350068 (+) | 189 | WP_006268379.1 | hypothetical protein | - |
| I6J38_RS06665 (I6J38_06665) | - | 1350168..1350875 (+) | 708 | WP_020998079.1 | hypothetical protein | - |
| I6J38_RS06670 (I6J38_06670) | - | 1350886..1352211 (+) | 1326 | WP_006268303.1 | type IV secretory system conjugative DNA transfer family protein | - |
| I6J38_RS06675 (I6J38_06675) | - | 1352301..1352615 (+) | 315 | WP_006268020.1 | hypothetical protein | - |
| I6J38_RS06680 (I6J38_06680) | - | 1352649..1353038 (+) | 390 | WP_006268423.1 | hypothetical protein | - |
| I6J38_RS06685 (I6J38_06685) | - | 1353055..1353786 (+) | 732 | WP_020998081.1 | metallophosphoesterase | - |
| I6J38_RS06690 (I6J38_06690) | - | 1353963..1354745 (+) | 783 | WP_020998082.1 | rolling circle replication-associated protein | - |
| I6J38_RS06695 (I6J38_06695) | - | 1354759..1354965 (+) | 207 | WP_006268084.1 | DUF3173 domain-containing protein | - |
| I6J38_RS06700 (I6J38_06700) | - | 1354955..1356040 (+) | 1086 | WP_006268469.1 | tyrosine-type recombinase/integrase | - |
| I6J38_RS06785 (I6J38_06785) | comR/comR2 | 1362666..1363148 (-) | 483 | WP_006267672.1 | sigma-70 family RNA polymerase sigma factor | Regulator |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 19855.70 Da Isoelectric Point: 7.9710
>NTDB_id=535543 I6J38_RS06785 WP_006267672.1 1362666..1363148(-) (comR/comR2) [Streptococcus constellatus strain FDAARGOS_1208]
MDFKELYDKVRGIVLKCRREYYVHLWELSDWDQEGMLVLYELVSRYPQLVESESRLYVYYKTKFRNHIKDILRKQESQKR
KLDRQVYEEVSEIGHKLSLKELYLDELVILRDQLKSYQKQLSPEKQEQYERLLADERFQGRQAMLRELRTYLQDYDERKS
MDFKELYDKVRGIVLKCRREYYVHLWELSDWDQEGMLVLYELVSRYPQLVESESRLYVYYKTKFRNHIKDILRKQESQKR
KLDRQVYEEVSEIGHKLSLKELYLDELVILRDQLKSYQKQLSPEKQEQYERLLADERFQGRQAMLRELRTYLQDYDERKS
Nucleotide
Download Length: 483 bp
>NTDB_id=535543 I6J38_RS06785 WP_006267672.1 1362666..1363148(-) (comR/comR2) [Streptococcus constellatus strain FDAARGOS_1208]
ATGGACTTCAAGGAATTGTATGACAAAGTGAGAGGGATCGTACTGAAGTGTCGCCGGGAATATTATGTCCACCTGTGGGA
GTTAAGTGATTGGGACCAAGAAGGGATGCTGGTCTTATATGAGTTGGTGAGTCGCTATCCGCAACTGGTAGAGTCAGAAA
GTCGTCTCTATGTTTACTATAAGACCAAGTTCCGTAATCACATCAAGGACATCCTGCGCAAACAAGAAAGCCAAAAGCGC
AAACTAGACCGTCAAGTCTATGAGGAAGTGAGCGAGATAGGTCACAAGCTCAGCCTGAAAGAACTCTATTTGGATGAATT
GGTGATTCTCCGAGACCAACTAAAGAGCTATCAAAAACAGCTAAGTCCAGAGAAACAAGAACAGTATGAGCGCTTACTAG
CAGATGAACGGTTTCAAGGACGCCAAGCGATGCTTCGGGAGTTACGGACCTACTTACAAGATTACGATGAAAGAAAAAGC
TAG
ATGGACTTCAAGGAATTGTATGACAAAGTGAGAGGGATCGTACTGAAGTGTCGCCGGGAATATTATGTCCACCTGTGGGA
GTTAAGTGATTGGGACCAAGAAGGGATGCTGGTCTTATATGAGTTGGTGAGTCGCTATCCGCAACTGGTAGAGTCAGAAA
GTCGTCTCTATGTTTACTATAAGACCAAGTTCCGTAATCACATCAAGGACATCCTGCGCAAACAAGAAAGCCAAAAGCGC
AAACTAGACCGTCAAGTCTATGAGGAAGTGAGCGAGATAGGTCACAAGCTCAGCCTGAAAGAACTCTATTTGGATGAATT
GGTGATTCTCCGAGACCAACTAAAGAGCTATCAAAAACAGCTAAGTCCAGAGAAACAAGAACAGTATGAGCGCTTACTAG
CAGATGAACGGTTTCAAGGACGCCAAGCGATGCTTCGGGAGTTACGGACCTACTTACAAGATTACGATGAAAGAAAAAGC
TAG
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.