Detailed information NTG0535543

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: LG939_RS00805
• Genome accession: NZ_CP084738
• Coordinates: 163253..164392 (+)
• Length: 379 a.a.
• NCBI ID: WP_020831131.1
• Uniprot ID: -
• Organism: Ralstonia pseudosolanacearum strain RS639
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 158253..169392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LG939_RS00780 (LG939_00785)	-	158612..158860 (-)	249	WP_011000353.1	YfhL family 4Fe-4S dicluster ferredoxin	-
LG939_RS00785 (LG939_00790)	coaD	158911..159417 (-)	507	WP_003262550.1	pantetheine-phosphate adenylyltransferase	-
LG939_RS00790 (LG939_00795)	rsmD	159613..160260 (-)	648	WP_016724254.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
LG939_RS00795 (LG939_00800)	-	160341..161684 (-)	1344	WP_011000351.1	pitrilysin family protein	-
LG939_RS00800 (LG939_00805)	-	161684..163192 (-)	1509	WP_377269794.1	pitrilysin family protein	-
LG939_RS00805 (LG939_00810)	pilA	163253..164392 (+)	1140	WP_020831131.1	signal recognition particle-docking protein FtsY	Machinery gene
LG939_RS00810 (LG939_00815)	-	164389..165027 (-)	639	WP_011000348.1	LysE/ArgO family amino acid transporter	-
LG939_RS00815 (LG939_00820)	maiA	165024..165674 (-)	651	WP_016724252.1	maleylacetoacetate isomerase	-
LG939_RS00820 (LG939_00825)	-	165678..166379 (-)	702	WP_011000346.1	fumarylacetoacetate hydrolase family protein	-
LG939_RS00825 (LG939_00830)	-	166527..167154 (+)	628	Protein_162	ANTAR domain-containing response regulator	-
LG939_RS00830 (LG939_00835)	-	167431..168693 (+)	1263	WP_011000344.1	CmpA/NrtA family ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 379 a.a.
• Molecular weight: 40157.41 Da
• Isoelectric Point: 5.8101

>NTDB_id=535543 LG939_RS00805 WP_020831131.1 163253..164392(+) (pilA) [Ralstonia pseudosolanacearum strain RS639]
MFSFWKKRKAEPQPAAELAPPAAAPEAAQAPAPAPAPVAAPVPTPAPAPVAVPDTPAAPAALDMQADDIETVPTPPVVEQ
ARKGWMSRLRSGLSKTSKSLTTLFVGVKVDEALFEELETALLMADAGVDATEYLLDELRRRVKAQRIETAEGVKTALRDL
LIELLHPLEKTMVLGRDQPTVIMIAGVNGAGKTTSIGKLCKHFQTYGQSVLLAAGDTFRAAAREQLVIWGQRNNVTVVAQ
ESGDPAAVIFDAVNAARARGIDIVMADTAGRLPTQLHLMEELKKVRRVIGKAMATAPHETLLVIDANTGQNALAQVKAFD
DALGLTGLIVTKLDGTAKGGILAAIARQRPVPVYFIGVGEQVEDLQPFSAREFADALLG

Nucleotide

• Length: 1140 bp

>NTDB_id=535543 LG939_RS00805 WP_020831131.1 163253..164392(+) (pilA) [Ralstonia pseudosolanacearum strain RS639]
ATGTTTAGTTTCTGGAAGAAGCGCAAGGCAGAGCCCCAGCCGGCTGCCGAACTGGCGCCGCCCGCCGCCGCGCCCGAAGC
CGCACAGGCTCCTGCTCCTGCCCCGGCCCCGGTTGCCGCCCCCGTCCCCACGCCGGCTCCCGCCCCGGTCGCCGTGCCGG
ATACGCCGGCCGCGCCGGCTGCGCTGGACATGCAGGCCGATGACATCGAGACCGTGCCGACGCCGCCCGTGGTGGAGCAG
GCGCGCAAAGGCTGGATGTCGCGCCTGCGCTCGGGCCTGTCGAAGACCAGCAAGAGCCTGACCACGCTGTTCGTCGGCGT
GAAGGTGGACGAGGCGCTGTTCGAGGAGCTGGAGACCGCGCTGCTGATGGCCGATGCCGGCGTCGATGCCACCGAGTACC
TGCTGGACGAACTGCGCCGCCGCGTGAAGGCCCAGCGCATCGAGACCGCCGAGGGCGTGAAGACCGCGCTGCGCGACCTG
CTCATCGAGCTGCTGCATCCGCTCGAAAAGACCATGGTGCTCGGCCGCGACCAGCCGACGGTGATCATGATCGCGGGCGT
CAACGGCGCCGGCAAGACCACCAGCATCGGCAAGCTGTGCAAGCACTTCCAGACCTATGGACAGTCCGTGCTGCTGGCCG
CCGGCGACACCTTCCGCGCCGCCGCGCGCGAGCAGCTGGTGATCTGGGGCCAGCGCAACAACGTGACCGTGGTGGCACAG
GAATCGGGCGACCCGGCCGCCGTGATCTTCGACGCGGTGAACGCGGCGCGCGCCCGCGGCATCGACATCGTCATGGCCGA
CACCGCCGGCCGCCTGCCGACCCAGCTGCACCTGATGGAAGAGCTGAAGAAGGTGCGCCGCGTGATCGGCAAAGCGATGG
CGACCGCGCCGCACGAGACCCTGCTGGTGATCGACGCCAACACCGGCCAGAACGCGCTGGCGCAGGTGAAAGCCTTCGAC
GATGCGCTCGGCCTGACCGGCCTGATCGTCACCAAGCTGGACGGCACCGCCAAGGGCGGCATCCTGGCCGCCATCGCGCG
GCAGCGGCCGGTGCCGGTATATTTCATCGGCGTGGGCGAGCAGGTGGAAGACCTGCAGCCGTTCTCCGCGCGCGAATTCG
CCGACGCGCTGCTGGGCTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (179-379)

• SRP54-type protein, helical bundle domain (SRP54_N) (98-159)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	52.163	100	0.573