Detailed information NTG0051850

Bioinformatically predicted

Overview

• Name: comR/comR2
• Type: Regulator
• Locus tag: SCIM_RS01540
• Genome accession: NC_018073
• Coordinates: 310113..310595 (+)
• Length: 160 a.a.
• NCBI ID: WP_014829578.1
• Uniprot ID: -
• Organism: Streptococcus intermedius JTH08
• Function: activate transcription of late competence genes (predicted from homology) Competence regulation

Genomic Context

Location: 305113..315595

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCIM_RS01515 (SCIM_0264)	-	306581..307336 (-)	756	WP_003077557.1	hypothetical protein	-
SCIM_RS01520 (SCIM_0265)	-	307484..308545 (+)	1062	WP_003077449.1	M24 family metallopeptidase	-
SCIM_RS01525 (SCIM_0266)	efp	308604..309164 (+)	561	WP_003077808.1	elongation factor P	-
SCIM_RS01530 (SCIM_0267)	-	309274..309663 (+)	390	WP_003077589.1	Asp23/Gls24 family envelope stress response protein	-
SCIM_RS01535 (SCIM_0268)	nusB	309656..310081 (+)	426	WP_003077471.1	transcription antitermination factor NusB	-
SCIM_RS01540 (SCIM_0269)	comR/comR2	310113..310595 (+)	483	WP_014829578.1	hypothetical protein	Regulator

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 19772.89 Da
• Isoelectric Point: 9.4017

>NTDB_id=51850 SCIM_RS01540 WP_014829578.1 310113..310595(+) (comR/comR2) [Streptococcus intermedius JTH08]
MRSPLFYKLYEKVRGIVLKCRREYYVHLWELSDWDQEGMIVLYELVSRHPYLVEEEAHLYVYYKTKFRNHIKDILRKQES
QKRKLDRQVYEEVSEIGHKLSLKGLYLDELVILRDQLKSYQKQLSPAKQEQYERLLADERFKGRQAMLRELRTYLKDYEM

Nucleotide

• Length: 483 bp

>NTDB_id=51850 SCIM_RS01540 WP_014829578.1 310113..310595(+) (comR/comR2) [Streptococcus intermedius JTH08]
GTGCGAAGTCCTCTTTTTTATAAGTTATATGAGAAAGTAAGGGGAATTGTGCTGAAGTGTCGGCGGGAATATTATGTCCA
TCTGTGGGAGCTAAGCGATTGGGATCAAGAAGGGATGATAGTCTTGTATGAGTTGGTAAGTCGCCACCCCTATTTGGTAG
AGGAAGAAGCCCATCTCTATGTCTACTATAAGACAAAGTTTCGGAATCACATAAAGGATATTCTGCGCAAACAAGAAAGT
CAAAAGCGCAAACTGGATCGCCAAGTGTATGAAGAGGTAAGTGAGATTGGGCACAAGTTAAGTCTGAAAGGTCTGTATCT
AGACGAGTTGGTAATACTCCGCGATCAATTAAAGTCCTATCAAAAGCAACTGAGTCCCGCCAAGCAAGAGCAGTATGAGC
GGTTACTGGCAGATGAAAGGTTCAAAGGCCGCCAAGCGATGCTTCGAGAGTTACGAACCTACTTAAAAGACTATGAGATG
TAG

Domains

No domain identified.

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR/comR2	Streptococcus gordonii str. Challis substr. CH1	60.784	95.625	0.581
comR/comR1	Streptococcus gordonii str. Challis substr. CH1	60.784	95.625	0.581
comX/sigX/comX2/sigX2	Streptococcus mitis NCTC 12261	55.769	97.5	0.544
comX/sigX/comX1/sigX1	Streptococcus mitis NCTC 12261	54.487	97.5	0.531
comX/sigX/comX2/sigX2	Streptococcus mitis SK321	53.846	97.5	0.525
comX/sigX/comX1/sigX1	Streptococcus mitis SK321	53.205	97.5	0.519
comX/comX1	Streptococcus pneumoniae D39	54.248	95.625	0.519
comX/comX1	Streptococcus pneumoniae R6	54.248	95.625	0.519
comX/comX2	Streptococcus pneumoniae R6	54.248	95.625	0.519
comX/comX2	Streptococcus pneumoniae Rx1	54.248	95.625	0.519
comX/comX1	Streptococcus pneumoniae Rx1	54.248	95.625	0.519
comX/comX2	Streptococcus pneumoniae D39	54.248	95.625	0.519
comX/comX1	Streptococcus pneumoniae TIGR4	53.595	95.625	0.513
comX/comX2	Streptococcus pneumoniae TIGR4	53.595	95.625	0.513
comX/sigX	Streptococcus mutans UA159	50.327	95.625	0.481
comX/sigX	Streptococcus suis isolate S10	49.02	95.625	0.469
comX/sigX	Streptococcus suis D9	49.02	95.625	0.469
comX/sigX	Streptococcus suis P1/7	49.02	95.625	0.469
comX/sigX/comX2/sigX2	Streptococcus pyogenes JRS4	45.638	93.125	0.425
comX/sigX/comX1/sigX1	Streptococcus pyogenes JRS4	45.638	93.125	0.425
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS8232	45.638	93.125	0.425
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS8232	45.638	93.125	0.425
comX/sigX/comX2/sigX2	Streptococcus pyogenes MGAS315	45.333	93.75	0.425
comX/sigX/comX1/sigX1	Streptococcus pyogenes MGAS315	45.333	93.75	0.425
comX	Streptococcus salivarius SK126	41.509	99.375	0.412
comX	Streptococcus thermophilus LMG 18311	41.509	99.375	0.412
comX	Streptococcus thermophilus LMD-9	41.509	99.375	0.412
comX/sigX	Streptococcus salivarius strain HSISS4	40.881	99.375	0.406
comX/sigX	Streptococcus infantarius subsp. infantarius ATCC BAA-102	39.61	96.25	0.381
comX	Streptococcus sobrinus strain NIDR 6715-7	36.478	99.375	0.363