Detailed information NTG0050402

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: CP31_RS11225
• Genome accession: NC_017730
• Coordinates: 1769157..1769312 (-)
• Length: 51 a.a.
• NCBI ID: WP_231113573.1
• Uniprot ID: -
• Organism: Corynebacterium pseudotuberculosis 31
• Function: dsDNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1764157..1774312

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CP31_RS08170 (CP31_08215)	-	1764219..1764773 (+)	555	WP_013242429.1	type II toxin-antitoxin system PemK/MazF family toxin	-
CP31_RS08175 (CP31_08220)	rpsT	1765071..1765334 (+)	264	WP_013242430.1	30S ribosomal protein S20	-
CP31_RS08180 (CP31_08225)	-	1765434..1766081 (-)	648	WP_014367443.1	LysE family translocator	-
CP31_RS08185 (CP31_08230)	-	1766071..1766472 (-)	402	WP_013242432.1	ankyrin repeat domain-containing protein	-
CP31_RS08190 (CP31_08235)	holA	1766483..1767457 (-)	975	WP_014655683.1	DNA polymerase III subunit delta	-
CP31_RS08195 (CP31_08240)	-	1767493..1769160 (-)	1668	WP_048653447.1	ComEC/Rec2 family competence protein	-
CP31_RS11225	comEA	1769157..1769312 (-)	156	WP_231113573.1	helix-hairpin-helix domain-containing protein	Machinery gene
CP31_RS11230	-	1769296..1769364 (-)	69	Protein_1592	hypothetical protein	-
CP31_RS08205 (CP31_08250)	-	1769987..1770817 (-)	831	WP_014655686.1	DegV family protein	-
CP31_RS08210 (CP31_08255)	-	1770831..1771574 (-)	744	WP_014300871.1	histidine phosphatase family protein	-
CP31_RS08215 (CP31_08260)	rsfS	1771579..1772046 (-)	468	WP_014655687.1	ribosome silencing factor	-
CP31_RS08220 (CP31_08265)	nadD	1772101..1772757 (-)	657	WP_013242439.1	nicotinate-nucleotide adenylyltransferase	-
CP31_RS08225 (CP31_08270)	-	1772794..1774080 (-)	1287	WP_014655688.1	glutamate-5-semialdehyde dehydrogenase	-

Sequence

Protein

• Length: 51 a.a.
• Molecular weight: 5464.38 Da
• Isoelectric Point: 10.6059

>NTDB_id=50402 CP31_RS11225 WP_231113573.1 1769157..1769312(-) (comEA) [Corynebacterium pseudotuberculosis 31]
MTELPGVGEKTAEAIIAHRQRIGGFKDIGQLKDVKGIGARKFEALSGRVTL

Nucleotide

• Length: 156 bp

>NTDB_id=50402 CP31_RS11225 WP_231113573.1 1769157..1769312(-) (comEA) [Corynebacterium pseudotuberculosis 31]
TTGACAGAGCTTCCTGGAGTAGGGGAGAAAACCGCAGAGGCGATCATCGCGCATCGGCAGCGCATAGGCGGATTTAAAGA
CATTGGACAGCTAAAAGACGTCAAGGGAATTGGGGCCAGAAAATTTGAGGCCTTATCGGGGCGCGTGACGTTATGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (2-50)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Acinetobacter baumannii strain A118	51.02	96.078	0.49
comEA	Acinetobacter baumannii D1279779	48.98	96.078	0.471
comA	Synechocystis sp. PCC 6803	46	98.039	0.451
comEA	Latilactobacillus sakei subsp. sakei 23K	44.898	96.078	0.431
comEA/celA/cilE	Streptococcus mitis NCTC 12261	43.137	100	0.431
comEA/celA/cilE	Streptococcus mitis SK321	43.137	100	0.431
comEA	Acinetobacter baylyi ADP1	41.176	100	0.412
comEA/celA/cilE	Streptococcus pneumoniae TIGR4	41.176	100	0.412
comEA/celA/cilE	Streptococcus pneumoniae Rx1	41.176	100	0.412
comEA/celA/cilE	Streptococcus pneumoniae D39	41.176	100	0.412
comEA/celA/cilE	Streptococcus pneumoniae R6	41.176	100	0.412
comEA	Bacillus subtilis subsp. subtilis str. 168	41.667	94.118	0.392
comEA	Staphylococcus aureus N315	39.216	100	0.392
comEA	Staphylococcus aureus MW2	39.216	100	0.392
comEA	Legionella pneumophila strain ERS1305867	57.143	68.627	0.392
comEA	Legionella pneumophila str. Paris	57.143	68.627	0.392
comEA	Vibrio cholerae strain A1552	40	98.039	0.392
comEA	Vibrio cholerae C6706	40	98.039	0.392
comEA	Vibrio parahaemolyticus RIMD 2210633	40	98.039	0.392
comEA	Vibrio campbellii strain DS40M4	40	98.039	0.392
comE1/comEA	Haemophilus influenzae Rd KW20	41.304	90.196	0.373