Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | IC571_RS10420 | Genome accession | NZ_CP061321 |
| Coordinates | 2010509..2011171 (+) | Length | 220 a.a. |
| NCBI ID | WP_215316592.1 | Uniprot ID | - |
| Organism | Polynucleobacter sp. MWH-UH2A | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2005509..2016171
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IC571_RS10400 (IC571_10385) | - | 2006986..2007567 (-) | 582 | WP_251373415.1 | DUF4390 domain-containing protein | - |
| IC571_RS10405 (IC571_10390) | rsmB | 2007564..2008883 (-) | 1320 | WP_251373418.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| IC571_RS10410 (IC571_10395) | fmt | 2008880..2009890 (-) | 1011 | WP_215316588.1 | methionyl-tRNA formyltransferase | - |
| IC571_RS10415 (IC571_10400) | def | 2009898..2010413 (-) | 516 | WP_215316590.1 | peptide deformylase | - |
| IC571_RS10420 (IC571_10405) | dprA | 2010509..2011171 (+) | 663 | WP_215316592.1 | DNA-processing protein DprA | Machinery gene |
| IC571_RS10425 (IC571_10410) | - | 2011355..2014012 (+) | 2658 | WP_215316594.1 | DNA topoisomerase III | - |
| IC571_RS10505 | mnmC | 2013982..2015073 (-) | 1092 | Protein_2042 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 220 a.a. Molecular weight: 23520.31 Da Isoelectric Point: 8.3671
>NTDB_id=481822 IC571_RS10420 WP_215316592.1 2010509..2011171(+) (dprA) [Polynucleobacter sp. MWH-UH2A]
MHTLFRKDANYPPRLNDLFDPPSPLYICGNLDLLKMPMIAVIGSRQASANGLRNAALFANQLAQSGALIISGLARGIDGA
AHRATINAPGKHFTAAVCGTGLDTVYPKEHRELAANICQRGLLISELDPGVGPKPFHFPRRNRIIAALALGVVVIEAAEH
SGSLITARIAADLGREVFALPGPAHDPLYAGCHQLIQQGAKLVCKPKEVLEELIFDKNSI
MHTLFRKDANYPPRLNDLFDPPSPLYICGNLDLLKMPMIAVIGSRQASANGLRNAALFANQLAQSGALIISGLARGIDGA
AHRATINAPGKHFTAAVCGTGLDTVYPKEHRELAANICQRGLLISELDPGVGPKPFHFPRRNRIIAALALGVVVIEAAEH
SGSLITARIAADLGREVFALPGPAHDPLYAGCHQLIQQGAKLVCKPKEVLEELIFDKNSI
Nucleotide
Download Length: 663 bp
>NTDB_id=481822 IC571_RS10420 WP_215316592.1 2010509..2011171(+) (dprA) [Polynucleobacter sp. MWH-UH2A]
ATGCACACACTATTCCGAAAGGATGCAAACTATCCGCCACGCCTAAATGATTTGTTTGACCCTCCCAGTCCCCTATATAT
ATGCGGCAATCTAGACTTACTGAAGATGCCCATGATTGCCGTCATTGGATCCCGTCAAGCGAGCGCCAACGGTCTCAGGA
ATGCGGCCTTATTTGCAAATCAACTCGCCCAATCTGGGGCCCTGATCATTTCTGGGCTAGCCAGAGGCATAGATGGTGCC
GCCCATCGCGCCACAATAAACGCACCCGGCAAGCATTTCACTGCAGCTGTTTGTGGGACAGGCCTAGACACTGTTTACCC
AAAAGAACATCGAGAATTGGCCGCCAATATTTGTCAACGAGGCTTATTAATTTCTGAGCTAGACCCCGGAGTGGGGCCCA
AACCCTTCCACTTTCCCAGGCGGAATCGAATTATTGCCGCCCTGGCTTTGGGCGTAGTTGTAATCGAGGCAGCAGAACAT
TCTGGCTCACTGATAACCGCACGAATTGCCGCAGATCTGGGGCGAGAGGTTTTTGCACTACCCGGCCCCGCACATGACCC
ACTTTATGCGGGCTGCCACCAACTCATTCAGCAGGGCGCCAAATTGGTTTGCAAGCCAAAAGAGGTGTTGGAAGAGCTCA
TTTTTGATAAAAACAGCATTTAA
ATGCACACACTATTCCGAAAGGATGCAAACTATCCGCCACGCCTAAATGATTTGTTTGACCCTCCCAGTCCCCTATATAT
ATGCGGCAATCTAGACTTACTGAAGATGCCCATGATTGCCGTCATTGGATCCCGTCAAGCGAGCGCCAACGGTCTCAGGA
ATGCGGCCTTATTTGCAAATCAACTCGCCCAATCTGGGGCCCTGATCATTTCTGGGCTAGCCAGAGGCATAGATGGTGCC
GCCCATCGCGCCACAATAAACGCACCCGGCAAGCATTTCACTGCAGCTGTTTGTGGGACAGGCCTAGACACTGTTTACCC
AAAAGAACATCGAGAATTGGCCGCCAATATTTGTCAACGAGGCTTATTAATTTCTGAGCTAGACCCCGGAGTGGGGCCCA
AACCCTTCCACTTTCCCAGGCGGAATCGAATTATTGCCGCCCTGGCTTTGGGCGTAGTTGTAATCGAGGCAGCAGAACAT
TCTGGCTCACTGATAACCGCACGAATTGCCGCAGATCTGGGGCGAGAGGTTTTTGCACTACCCGGCCCCGCACATGACCC
ACTTTATGCGGGCTGCCACCAACTCATTCAGCAGGGCGCCAAATTGGTTTGCAAGCCAAAAGAGGTGTTGGAAGAGCTCA
TTTTTGATAAAAACAGCATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.