Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | GQ359_RS10075 | Genome accession | NZ_CP061319 |
| Coordinates | 1924363..1925037 (+) | Length | 224 a.a. |
| NCBI ID | WP_215387001.1 | Uniprot ID | - |
| Organism | Polynucleobacter sp. AM-7D1 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 1919363..1930037
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQ359_RS10050 (GQ359_10050) | - | 1919994..1920575 (-) | 582 | WP_251367878.1 | DUF4390 domain-containing protein | - |
| GQ359_RS10055 (GQ359_10055) | rsmB | 1920572..1921885 (-) | 1314 | WP_215386997.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| GQ359_RS10060 (GQ359_10060) | htpX | 1921887..1922753 (-) | 867 | WP_215386998.1 | zinc metalloprotease HtpX | - |
| GQ359_RS10065 (GQ359_10065) | fmt | 1922746..1923768 (-) | 1023 | WP_215386999.1 | methionyl-tRNA formyltransferase | - |
| GQ359_RS10070 (GQ359_10070) | def | 1923776..1924291 (-) | 516 | WP_215387000.1 | peptide deformylase | - |
| GQ359_RS10075 (GQ359_10075) | dprA | 1924363..1925037 (+) | 675 | WP_215387001.1 | DNA-processing protein DprA | Machinery gene |
| GQ359_RS10080 (GQ359_10080) | - | 1925258..1927936 (+) | 2679 | WP_251367879.1 | DNA topoisomerase III | - |
| GQ359_RS10150 | mnmC | 1927906..1928997 (-) | 1092 | Protein_1974 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 224 a.a. Molecular weight: 24217.04 Da Isoelectric Point: 9.2992
>NTDB_id=481811 GQ359_RS10075 WP_215387001.1 1924363..1925037(+) (dprA) [Polynucleobacter sp. AM-7D1]
MNKPKNSDIIQIRQNSAGYPARLLDLYDPPNSLYIYGDIRLLDLPMVAIVGSRKASQEGIKNAHYFAQALSAKGYLIISG
LARGIDGAAHLGALGQKQDRPTIAVCGTGLDIVYPKEHQRLAQAIGSSGLLVSELEPGLGPKAWHFPRRNRIIAALALGI
LVIEAAERSGSLITAKIGLELGREIFAIPGSIHHPLSRGCHQLLQQGAKLVQSPKDILEELENW
MNKPKNSDIIQIRQNSAGYPARLLDLYDPPNSLYIYGDIRLLDLPMVAIVGSRKASQEGIKNAHYFAQALSAKGYLIISG
LARGIDGAAHLGALGQKQDRPTIAVCGTGLDIVYPKEHQRLAQAIGSSGLLVSELEPGLGPKAWHFPRRNRIIAALALGI
LVIEAAERSGSLITAKIGLELGREIFAIPGSIHHPLSRGCHQLLQQGAKLVQSPKDILEELENW
Nucleotide
Download Length: 675 bp
>NTDB_id=481811 GQ359_RS10075 WP_215387001.1 1924363..1925037(+) (dprA) [Polynucleobacter sp. AM-7D1]
ATGAACAAGCCGAAAAATTCAGACATCATCCAAATTCGCCAAAACTCCGCTGGCTATCCAGCTCGCCTATTAGATTTATA
CGATCCTCCCAACTCACTCTATATATATGGGGATATTCGCTTGCTGGATTTGCCGATGGTTGCCATTGTTGGATCCCGCA
AGGCCAGCCAAGAGGGAATCAAAAATGCCCACTATTTTGCGCAAGCCCTATCTGCAAAGGGCTATCTCATTATTTCGGGC
TTAGCCAGGGGTATTGATGGTGCCGCCCACTTAGGCGCCCTTGGACAGAAGCAGGACCGACCAACCATCGCAGTATGCGG
AACGGGGCTGGACATTGTGTACCCCAAAGAGCATCAAAGATTGGCCCAAGCCATTGGTAGCAGCGGCTTACTTGTGTCTG
AATTAGAGCCAGGATTGGGTCCAAAAGCCTGGCACTTCCCACGCAGGAACCGCATTATTGCCGCGCTAGCGCTAGGAATC
CTGGTAATCGAAGCAGCTGAGCGCTCTGGCTCACTGATTACAGCCAAAATAGGGCTAGAGCTTGGCCGTGAGATCTTTGC
AATTCCTGGGTCGATACATCACCCTCTATCAAGGGGCTGTCACCAGCTACTTCAGCAAGGGGCCAAACTCGTCCAATCCC
CCAAAGATATCCTGGAAGAGCTAGAAAATTGGTGA
ATGAACAAGCCGAAAAATTCAGACATCATCCAAATTCGCCAAAACTCCGCTGGCTATCCAGCTCGCCTATTAGATTTATA
CGATCCTCCCAACTCACTCTATATATATGGGGATATTCGCTTGCTGGATTTGCCGATGGTTGCCATTGTTGGATCCCGCA
AGGCCAGCCAAGAGGGAATCAAAAATGCCCACTATTTTGCGCAAGCCCTATCTGCAAAGGGCTATCTCATTATTTCGGGC
TTAGCCAGGGGTATTGATGGTGCCGCCCACTTAGGCGCCCTTGGACAGAAGCAGGACCGACCAACCATCGCAGTATGCGG
AACGGGGCTGGACATTGTGTACCCCAAAGAGCATCAAAGATTGGCCCAAGCCATTGGTAGCAGCGGCTTACTTGTGTCTG
AATTAGAGCCAGGATTGGGTCCAAAAGCCTGGCACTTCCCACGCAGGAACCGCATTATTGCCGCGCTAGCGCTAGGAATC
CTGGTAATCGAAGCAGCTGAGCGCTCTGGCTCACTGATTACAGCCAAAATAGGGCTAGAGCTTGGCCGTGAGATCTTTGC
AATTCCTGGGTCGATACATCACCCTCTATCAAGGGGCTGTCACCAGCTACTTCAGCAAGGGGCCAAACTCGTCCAATCCC
CCAAAGATATCCTGGAAGAGCTAGAAAATTGGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.