Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | C2747_RS10495 | Genome accession | NZ_CP061314 |
| Coordinates | 2034374..2035072 (+) | Length | 232 a.a. |
| NCBI ID | WP_215331736.1 | Uniprot ID | - |
| Organism | Polynucleobacter corsicus strain AP-Melu-1000-A1 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2029374..2040072
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2747_RS10475 (C2747_10445) | - | 2030891..2031472 (-) | 582 | WP_251374764.1 | DUF4390 domain-containing protein | - |
| C2747_RS10480 (C2747_10450) | rsmB | 2031469..2032782 (-) | 1314 | WP_215331733.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| C2747_RS10485 (C2747_10455) | fmt | 2032784..2033779 (-) | 996 | WP_215331734.1 | methionyl-tRNA formyltransferase | - |
| C2747_RS10490 (C2747_10460) | def | 2033787..2034302 (-) | 516 | WP_215331735.1 | peptide deformylase | - |
| C2747_RS10495 (C2747_10465) | dprA | 2034374..2035072 (+) | 699 | WP_215331736.1 | DNA-processing protein DprA | Machinery gene |
| C2747_RS10500 (C2747_10470) | - | 2035336..2037948 (+) | 2613 | WP_215333174.1 | DNA topoisomerase III | - |
| C2747_RS10585 | mnmC | 2038008..2039009 (-) | 1002 | Protein_2062 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 232 a.a. Molecular weight: 24777.62 Da Isoelectric Point: 9.4122
>NTDB_id=481766 C2747_RS10495 WP_215331736.1 2034374..2035072(+) (dprA) [Polynucleobacter corsicus strain AP-Melu-1000-A1]
MRTPKNPNIIQVHRNTPNYPARLLDLSDPPNSLYIYGDISLLDLPMIAIVGSRAASPEGIKNAYYFAQALSAEGFLVISG
LARGVDGAAHRGALGQNQGHRTIAVCGSGLDIVYPREHLGLAQAIANSGLLVSELAPGLGPKAWHFPRRNRIIAALSLGI
LVIEAAERSGSLITARLGCELGREIFAIPGSIHSPLSKGCHQLLQQGAKLVQSPQDILEELPKWSKTSFKGI
MRTPKNPNIIQVHRNTPNYPARLLDLSDPPNSLYIYGDISLLDLPMIAIVGSRAASPEGIKNAYYFAQALSAEGFLVISG
LARGVDGAAHRGALGQNQGHRTIAVCGSGLDIVYPREHLGLAQAIANSGLLVSELAPGLGPKAWHFPRRNRIIAALSLGI
LVIEAAERSGSLITARLGCELGREIFAIPGSIHSPLSKGCHQLLQQGAKLVQSPQDILEELPKWSKTSFKGI
Nucleotide
Download Length: 699 bp
>NTDB_id=481766 C2747_RS10495 WP_215331736.1 2034374..2035072(+) (dprA) [Polynucleobacter corsicus strain AP-Melu-1000-A1]
ATGCGCACACCTAAAAATCCAAACATCATCCAAGTTCATCGAAATACCCCCAACTACCCAGCTCGTCTCTTGGATTTATC
TGATCCACCCAATTCACTCTATATATACGGGGATATAAGCCTATTAGATTTACCCATGATTGCCATTGTGGGTTCACGTG
CCGCTAGTCCAGAAGGGATCAAGAATGCTTACTATTTTGCGCAAGCCCTATCTGCCGAGGGCTTTCTCGTTATTTCCGGG
CTGGCCAGGGGTGTTGATGGGGCGGCCCACCGAGGTGCGCTTGGGCAAAATCAGGGGCATCGAACCATAGCGGTATGCGG
TAGTGGGCTAGATATTGTGTATCCACGAGAGCATTTAGGCCTAGCCCAAGCCATTGCCAACAGCGGGCTCTTGGTGTCTG
AGCTAGCTCCAGGTCTAGGGCCAAAAGCTTGGCACTTTCCGCGCAGGAACCGCATCATTGCGGCCCTGTCCCTTGGAATA
CTTGTGATTGAGGCGGCCGAGCGCTCTGGCTCGCTCATTACAGCCAGACTAGGTTGTGAGCTTGGTCGTGAAATTTTTGC
AATTCCTGGGTCAATACACAGCCCACTCTCTAAAGGCTGCCATCAACTACTGCAGCAAGGTGCCAAGCTAGTTCAATCAC
CACAAGACATTCTCGAGGAGTTGCCAAAATGGTCAAAAACCTCATTTAAAGGCATTTAA
ATGCGCACACCTAAAAATCCAAACATCATCCAAGTTCATCGAAATACCCCCAACTACCCAGCTCGTCTCTTGGATTTATC
TGATCCACCCAATTCACTCTATATATACGGGGATATAAGCCTATTAGATTTACCCATGATTGCCATTGTGGGTTCACGTG
CCGCTAGTCCAGAAGGGATCAAGAATGCTTACTATTTTGCGCAAGCCCTATCTGCCGAGGGCTTTCTCGTTATTTCCGGG
CTGGCCAGGGGTGTTGATGGGGCGGCCCACCGAGGTGCGCTTGGGCAAAATCAGGGGCATCGAACCATAGCGGTATGCGG
TAGTGGGCTAGATATTGTGTATCCACGAGAGCATTTAGGCCTAGCCCAAGCCATTGCCAACAGCGGGCTCTTGGTGTCTG
AGCTAGCTCCAGGTCTAGGGCCAAAAGCTTGGCACTTTCCGCGCAGGAACCGCATCATTGCGGCCCTGTCCCTTGGAATA
CTTGTGATTGAGGCGGCCGAGCGCTCTGGCTCGCTCATTACAGCCAGACTAGGTTGTGAGCTTGGTCGTGAAATTTTTGC
AATTCCTGGGTCAATACACAGCCCACTCTCTAAAGGCTGCCATCAACTACTGCAGCAAGGTGCCAAGCTAGTTCAATCAC
CACAAGACATTCTCGAGGAGTTGCCAAAATGGTCAAAAACCTCATTTAAAGGCATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.