Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | C2758_RS10635 | Genome accession | NZ_CP061312 |
| Coordinates | 2023857..2024555 (+) | Length | 232 a.a. |
| NCBI ID | WP_215328290.1 | Uniprot ID | - |
| Organism | Polynucleobacter sp. AP-Sving-400A-A2 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 2018857..2029555
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2758_RS10615 (C2758_10600) | - | 2020374..2020955 (-) | 582 | WP_251369202.1 | DUF4390 domain-containing protein | - |
| C2758_RS10620 (C2758_10605) | rsmB | 2020952..2022265 (-) | 1314 | WP_215328285.1 | 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB | - |
| C2758_RS10625 (C2758_10610) | fmt | 2022267..2023262 (-) | 996 | WP_215328287.1 | methionyl-tRNA formyltransferase | - |
| C2758_RS10630 (C2758_10615) | def | 2023270..2023785 (-) | 516 | WP_215328288.1 | peptide deformylase | - |
| C2758_RS10635 (C2758_10620) | dprA | 2023857..2024555 (+) | 699 | WP_215328290.1 | DNA-processing protein DprA | Machinery gene |
| C2758_RS10640 (C2758_10625) | - | 2024753..2027431 (+) | 2679 | WP_371817700.1 | DNA topoisomerase III | - |
| C2758_RS10775 | mnmC | 2027401..2028492 (-) | 1092 | Protein_2091 | FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC | - |
Sequence
Protein
Download Length: 232 a.a. Molecular weight: 25075.92 Da Isoelectric Point: 8.6791
>NTDB_id=481755 C2758_RS10635 WP_215328290.1 2023857..2024555(+) (dprA) [Polynucleobacter sp. AP-Sving-400A-A2]
MRTPKNLNIIQIHRNTPDYPARLLDLSDPPNSLYIYGDIRVLDLPMIAIVGSRAASPEGIRNAYYFAQALSAEGYLVISG
LARGVDGAAHRGALGQNQEHRTLAVCGSGLDIVYPREHLGLAQAIANSGLLVSELAPGLGPKAWHFPRRNRIIAALSLGI
LVIEAAERSGSLITARLGCELGREIFAIPGSIHSPLSRGCHQLLQQGAKLVQSPQDILEELPKWPKTSFKDI
MRTPKNLNIIQIHRNTPDYPARLLDLSDPPNSLYIYGDIRVLDLPMIAIVGSRAASPEGIRNAYYFAQALSAEGYLVISG
LARGVDGAAHRGALGQNQEHRTLAVCGSGLDIVYPREHLGLAQAIANSGLLVSELAPGLGPKAWHFPRRNRIIAALSLGI
LVIEAAERSGSLITARLGCELGREIFAIPGSIHSPLSRGCHQLLQQGAKLVQSPQDILEELPKWPKTSFKDI
Nucleotide
Download Length: 699 bp
>NTDB_id=481755 C2758_RS10635 WP_215328290.1 2023857..2024555(+) (dprA) [Polynucleobacter sp. AP-Sving-400A-A2]
ATGCGCACACCTAAAAATCTAAACATCATCCAAATTCACCGAAATACCCCCGACTACCCAGCTCGTCTATTGGATTTATC
TGATCCGCCCAATTCACTCTATATATATGGGGATATACGCGTATTGGATTTACCCATGATTGCCATTGTGGGGTCACGCG
CCGCCAGCCCGGAAGGGATCAGGAATGCTTACTATTTTGCGCAAGCTCTATCTGCCGAGGGTTATCTTGTTATTTCGGGA
CTTGCCAGGGGTGTTGATGGGGCTGCTCACCGAGGTGCACTTGGGCAAAATCAGGAGCATCGAACCTTAGCAGTGTGTGG
TAGTGGGCTAGATATTGTGTATCCACGAGAGCATTTGGGTCTGGCCCAAGCTATCGCCAACAGCGGGCTCTTAGTGTCTG
AGCTAGCTCCAGGTCTGGGACCAAAAGCTTGGCACTTCCCGCGCAGGAACCGCATCATTGCGGCCTTGTCCCTTGGAATA
CTCGTGATTGAGGCGGCCGAGCGCTCTGGCTCGCTCATTACAGCTAGGCTAGGTTGTGAGCTTGGTCGTGAGATTTTTGC
GATTCCTGGGTCAATACACAGCCCACTTTCTAGGGGCTGCCATCAACTACTGCAGCAAGGCGCCAAGCTAGTTCAATCCC
CGCAAGACATCCTCGAGGAGCTGCCAAAATGGCCAAAAACCTCATTTAAAGATATTTAA
ATGCGCACACCTAAAAATCTAAACATCATCCAAATTCACCGAAATACCCCCGACTACCCAGCTCGTCTATTGGATTTATC
TGATCCGCCCAATTCACTCTATATATATGGGGATATACGCGTATTGGATTTACCCATGATTGCCATTGTGGGGTCACGCG
CCGCCAGCCCGGAAGGGATCAGGAATGCTTACTATTTTGCGCAAGCTCTATCTGCCGAGGGTTATCTTGTTATTTCGGGA
CTTGCCAGGGGTGTTGATGGGGCTGCTCACCGAGGTGCACTTGGGCAAAATCAGGAGCATCGAACCTTAGCAGTGTGTGG
TAGTGGGCTAGATATTGTGTATCCACGAGAGCATTTGGGTCTGGCCCAAGCTATCGCCAACAGCGGGCTCTTAGTGTCTG
AGCTAGCTCCAGGTCTGGGACCAAAAGCTTGGCACTTCCCGCGCAGGAACCGCATCATTGCGGCCTTGTCCCTTGGAATA
CTCGTGATTGAGGCGGCCGAGCGCTCTGGCTCGCTCATTACAGCTAGGCTAGGTTGTGAGCTTGGTCGTGAGATTTTTGC
GATTCCTGGGTCAATACACAGCCCACTTTCTAGGGGCTGCCATCAACTACTGCAGCAAGGCGCCAAGCTAGTTCAATCCC
CGCAAGACATCCTCGAGGAGCTGCCAAAATGGCCAAAAACCTCATTTAAAGATATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.